RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CXCL13O43927 109 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 CTSSP25774 331 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 SNTB2Q13425 540 aaKnown RBP15.65■□□□□ 0.1
SNX1-208ENST00000559844 TBRG1Q3YBR2 411 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 PHYHD1Q5SRE7 291 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 CISD2Q8N5K1 135 aaKnown RBP15.65■□□□□ 0.1
SNX1-208ENST00000559844 ZNF416Q9BWM5 594 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 DDX28Q9NUL7 540 aaKnown RBP15.65■□□□□ 0.1
SNX1-208ENST00000559844 ZFYVE26Q68DK2 2539 aa15.65■□□□□ 0.1
SNX1-208ENST00000559844 ALPK2Q86TB3 2170 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 LOC390937A0A1W2PQ73 354 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 DOK2O60496 412 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 DHFRP00374 187 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 CRYABP02511 175 aaKnown RBP15.64■□□□□ 0.09
SNX1-208ENST00000559844 SELENOPP49908 381 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 GFRA1P56159 465 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 ABLIM2Q6H8Q1 611 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 OR52I2Q8NH67 350 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 OR10D3Q8NH80 312 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 CPNE4Q96A23 557 aaPredicted RBP15.64■□□□□ 0.09
SNX1-208ENST00000559844 SLC25A28Q96A46 364 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 DEFB127Q9H1M4 99 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 MOV10Q9HCE1 1003 aaKnown RBP15.64■□□□□ 0.09
SNX1-208ENST00000559844 RBMX2Q9Y388 322 aaKnown RBP15.64■□□□□ 0.09
SNX1-208ENST00000559844 FLVCR1Q9Y5Y0 555 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 HPNP05981 417 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 CX3CR1P49238 355 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 PRKXP51817 358 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 C1orf100Q5SVJ3 147 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 ATAD3CQ5T2N8 411 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 ZNF283Q8N7M2 679 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 NABP1Q96AH0 204 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 FGGYQ96C11 551 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 SORCS2Q96PQ0 1159 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 RBM24Q9BX46 236 aaKnown RBP15.64■□□□□ 0.09
SNX1-208ENST00000559844 ZDHHC11Q9H8X9 412 aa15.64■□□□□ 0.09
SNX1-208ENST00000559844 ZNF716A6NP11 495 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 CTAG2O75638 210 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 TCRBP04435 133 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 ARSBP15848 533 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 BDKRB2P30411 391 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 ZNF121P58317 390 aaPredicted RBP15.63■□□□□ 0.09
SNX1-208ENST00000559844 MRPS34P82930 218 aaKnown RBP15.63■□□□□ 0.09
SNX1-208ENST00000559844 SPOCK1Q08629 439 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 CBX3Q13185 183 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 ENDOGQ14249 297 aaKnown RBP15.63■□□□□ 0.09
SNX1-208ENST00000559844 SLC10A1Q14973 349 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 PRR30Q53SZ7 412 aaPredicted RBP15.63■□□□□ 0.09
SNX1-208ENST00000559844 GLYATL3Q5SZD4 288 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 OR5D14Q8NGL3 314 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 DEDD2Q8WXF8 326 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 ST6GAL2Q96JF0 529 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 CACNG6Q9BXT2 260 aa15.63■□□□□ 0.09
SNX1-208ENST00000559844 TMEM272A0A1B0GTI8 110 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 GGT3PA6NGU5 568 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 GNALP38405 381 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 STARP49675 285 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 HIST1H3AP68431 136 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 HIST2H3PS2Q5TEC6 136 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 DNM1P46Q6ZS02 220 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 HIST2H3AQ71DI3 136 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 JAGN1Q8N5M9 183 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 OR1M1Q8NGA1 313 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 OR51A2Q8NGJ7 313 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 SNRNP40Q96DI7 357 aaKnown RBP15.62■□□□□ 0.09
SNX1-208ENST00000559844 SLC6A15Q9H2J7 730 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 COL6A6A6NMZ7 2263 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 KIAA1549Q9HCM3 1950 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 A0A1B0GTI1 187 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 ANKRD20A5PA0PJZ0 165 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 LMX1BO60663 402 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 APOC1P02654 83 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 ERCC1P07992 297 aaPredicted RBP15.62■□□□□ 0.09
SNX1-208ENST00000559844 TMIGD3P0DMS9 266 aaPredicted RBP15.62■□□□□ 0.09
SNX1-208ENST00000559844 ZNF20P17024 532 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 GIFP27352 417 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 RAG2P55895 527 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 MTFR2Q6P444 385 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 DOK3Q7L591 496 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 AAED1Q7RTV5 226 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 ADGRE4PQ86SQ3 457 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 CDH24Q86UP0 819 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 OR8B12Q8NGG6 310 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 OR1J2Q8NGS2 313 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 OR51E1Q8TCB6 317 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 PTX4Q96A99 478 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 ACTR6Q9GZN1 396 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 LDAHQ9H6V9 325 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 ACKR4Q9NPB9 350 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 TMEM138Q9NPI0 162 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 CGGBP1Q9UFW8 167 aaPredicted RBP15.62■□□□□ 0.09
SNX1-208ENST00000559844 LIPGQ9Y5X9 500 aa15.62■□□□□ 0.09
SNX1-208ENST00000559844 CYTIPO60759 359 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 MT-ND4P03905 459 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 RAB3AP20336 220 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 CCL1P22362 96 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 EFNB2P52799 333 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 PLA2G7Q13093 441 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 FAM27BQ5VT28 67 aa15.61■□□□□ 0.09
SNX1-208ENST00000559844 ZNF813Q6ZN06 617 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms