RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 C6orf52Q5T4I8 152 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 MEDAGQ5VYS4 303 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 SHEQ5VZ18 495 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 FAM57BQ71RH2 274 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 C1orf174Q8IYL3 243 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 ZNF679Q8IYX0 411 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 ZNF283Q8N7M2 679 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 VRK1Q99986 396 aaPredicted RBP9.72□□□□□ -0.85
SNX1-204ENST00000559061 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 DYNLRB1Q9NP97 96 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 G6PC2Q9NQR9 355 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 MRPS18AQ9NVS2 196 aaKnown RBP9.72□□□□□ -0.85
SNX1-204ENST00000559061 DCAF16Q9NXF7 216 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 H2AFY2Q9P0M6 372 aaPredicted RBP9.72□□□□□ -0.85
SNX1-204ENST00000559061 RRP15Q9Y3B9 282 aaKnown RBP9.72□□□□□ -0.85
SNX1-204ENST00000559061 PCDHGB5Q9Y5G0 923 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 CACNG2Q9Y698 323 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 ACANP16112 2415 aa9.72□□□□□ -0.85
SNX1-204ENST00000559061 MED13LQ71F56 2210 aa9.71□□□□□ -0.85
SNX1-204ENST00000559061 ZANQ9Y493 2812 aa9.71□□□□□ -0.85
SNX1-204ENST00000559061 H0YAE9 185 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 OR2T7P0C7T2 308 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 TUBG1P23258 451 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 COL8A2P25067 703 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 ACKR3P25106 362 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 GCH1P30793 250 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 FAM3AP98173 230 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 IL5RAQ01344 420 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 EGR3Q06889 387 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 KRTAP1-1Q07627 177 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 TAF13Q15543 124 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 NKPD1Q17RQ9 610 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 CLEC12BQ2HXU8 276 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 ARL9Q6T311 187 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 ZNF555Q8NEP9 628 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 OR10H4Q8NGA5 316 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 OR52I1Q8NGK6 324 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 OR2T27Q8NH04 317 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 C10orf105Q8TEF2 133 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 ASB17Q8WXJ9 295 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 RFKQ969G6 155 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 TRMT61AQ96FX7 289 aaKnown RBP9.71□□□□□ -0.86
SNX1-204ENST00000559061 MNTQ99583 582 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 SLC30A2Q9BRI3 323 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 FGF23Q9GZV9 251 aaPredicted RBP9.71□□□□□ -0.86
SNX1-204ENST00000559061 BRD7Q9NPI1 651 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 TUBG2Q9NRH3 451 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.71□□□□□ -0.86
SNX1-204ENST00000559061 PMF1-BGLAPU3KQ54 211 aa9.71□□□□□ -0.86
SNX1-204ENST00000559061 CD300LBA8K4G0 201 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 ZNF670-ZNF695F2Z2N8 137 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 H0YJX3 145 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 SPRY3O43610 288 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TIMM8AO60220 97 aaPredicted RBP9.7□□□□□ -0.86
SNX1-204ENST00000559061 MPZL2O60487 215 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TTRP02766 147 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 ANXA2P07355 339 aaKnown RBP9.7□□□□□ -0.86
SNX1-204ENST00000559061 CD55P08174 381 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 SELEP16581 610 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 HSD11B1P28845 292 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 DCTDP32321 178 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 ZNF81P51508 661 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 CCL8P80075 99 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 POU4F2Q12837 409 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 IL18R1Q13478 541 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 RIN1Q13671 783 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 OR8B8Q15620 311 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TSTQ16762 297 aaKnown RBP9.7□□□□□ -0.86
SNX1-204ENST00000559061 CDONQ4KMG0 1287 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TTC23Q5W5X9 447 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 KRT77Q7Z794 578 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 PRSS35Q8N3Z0 413 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 BHLHE23Q8NDY6 225 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 OR56B2PQ8NGI1 322 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 NEU4Q8WWR8 484 aaPredicted RBP9.7□□□□□ -0.86
SNX1-204ENST00000559061 RORBQ92753 470 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 DVL3Q92997 716 aaPredicted RBP9.7□□□□□ -0.86
SNX1-204ENST00000559061 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 COX4I2Q96KJ9 171 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 COG8Q96MW5 612 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 ACOXLQ9NUZ1 547 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 NKIRAS2Q9NYR9 191 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 N6AMT1Q9Y5N5 214 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 TMEM14AQ9Y6G1 99 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 DYSFO75923 2080 aa9.7□□□□□ -0.86
SNX1-204ENST00000559061 A0A1B0GTI1 187 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 VSTM5A8MXK1 200 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 TBX1O43435 398 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 FAM20BO75063 409 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 ZNF254O75437 659 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 HLA-DPB1P04440 258 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 LIMS3P0CW19 117 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 LIMS4P0CW20 117 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 DAOP14920 347 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 KIR3DL2P43630 455 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms