RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 FAM209AQ5JX71 171 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC35D3Q5M8T2 416 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 LSRQ86X29 649 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZDHHC22Q8N966 263 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 OR1J2Q8NGS2 313 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 PTP4A1Q93096 173 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZNF75AQ96N20 296 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 EMC6Q9BV81 110 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 NMNAT2Q9BZQ4 307 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 CDH20Q9HBT6 801 aa13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 MRPL39Q9NYK5 338 aaKnown RBP13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 MYEF2Q9P2K5 600 aaKnown RBP13.64□□□□□ -0.23
CDC42BPB-203ENST00000558867 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 LRRN3E7EW58 273 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 SCG5P05408 212 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ADRA2CP18825 462 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 SDHAP31040 664 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 RPL4P36578 427 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 CSNK1A1P48729 337 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC25A1P53007 311 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC3A1Q07837 685 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ACSM1Q08AH1 577 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 MLLT11Q13015 90 aaPredicted RBP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 LSAMPQ13449 338 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 CRMP1Q14194 572 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 SPHARQ15513 63 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 PHYHD1Q5SRE7 291 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 PLBD1Q6P4A8 553 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 TREML4Q6UXN2 200 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 CPEB3Q8NE35 698 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 OR5J2Q8NH18 312 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 OR52N1Q8NH53 320 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZNF519Q8TB69 540 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ST7LQ8TDW4 575 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 ELMOD3Q96FG2 381 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 TEAD3Q99594 435 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 MGLLQ99685 303 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 NAA50Q9GZZ1 169 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 CHCHD3Q9NX63 227 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 PPIAL4AQ9Y536 164 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 IER3IP1Q9Y5U9 82 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 WNK2Q9Y3S1 2297 aa13.63□□□□□ -0.23
CDC42BPB-203ENST00000558867 MS4A18H0YCH9 400 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 MYL12BO14950 172 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 OR6A2O95222 327 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 IGHV2-5P01817 119 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 LIMS3P0CW19 117 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 LIMS4P0CW20 117 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 OR8G3PP0DMU2 310 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 HIST1H1CP16403 213 aaKnown RBP13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 CD36P16671 472 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 AHCYP23526 432 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 LIPAP38571 399 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 AQP2P41181 271 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 WNT4P56705 351 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 RPL18Q07020 188 aaKnown RBP13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 PUDPQ08623 228 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 MS4A18Q3C1V0 323 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 TIMM50Q3ZCQ8 353 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 ARMCX4Q5H9R4 360 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 PXKQ7Z7A4 578 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 C10orf53Q8N6V4 93 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZNF485Q8NCK3 441 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 NPEPL1Q8NDH3 523 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 SLC30A7Q8NEW0 376 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 BBS1Q8NFJ9 593 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 MOSPD2Q8NHP6 518 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 GAL3ST1Q99999 423 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZNF649Q9BS31 505 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 BCL2L14Q9BZR8 327 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 RNF121Q9H920 327 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 SAP30LQ9HAJ7 183 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 ESM1Q9NQ30 184 aa13.62□□□□□ -0.23
CDC42BPB-203ENST00000558867 FAM183AA6NL82 134 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 CCRL2O00421 344 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 ZNF250P15622 560 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 PRTN3P24158 256 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 RGS6P49758 472 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 ETV1P50549 477 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 ACTC1P68032 377 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 ACTA1P68133 377 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 BDH1Q02338 343 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 PLP2Q04941 152 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 TBC1D28Q2M2D7 210 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 UNQ6126/PRO20091Q6UXV3 157 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 ADCK1Q86TW2 530 aa13.61□□□□□ -0.23
CDC42BPB-203ENST00000558867 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms