RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 E9PQ18 207 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 J3QW42 95 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 MLNRO43193 412 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 IGHV4-31P0DP07 118 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 SELEP16581 610 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ACHEP22303 614 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 LIPAP38571 399 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 SLC15A1P46059 708 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ZNF121P58317 390 aaPredicted RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 GRB2P62993 217 aaKnown RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 MVKQ03426 396 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 MALLQ13021 153 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 LCN1P1Q5VSP4 162 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 LPCAT4Q643R3 524 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 PRSS45Q7RTY3 260 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 SPATA3Q8NHX4 192 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 FAM81AQ8TBF8 368 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 CCL17Q92583 94 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 DVL3Q92997 716 aaPredicted RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 STMN2Q93045 179 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 PPP1R14AQ96A00 147 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 EME1Q96AY2 570 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ZNF582Q96NG8 517 aaPredicted RBP11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 PRRG3Q9BZD7 231 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ADGRL4Q9HBW9 690 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ENOPH1Q9UHY7 261 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
TSPAN3-205ENST00000558745 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 F5H5P2 479 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 ADH4P08319 380 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 GABPB1Q06547 395 aaPredicted RBP11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 LRRC36Q1X8D7 754 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 FAM209AQ5JX71 171 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 OR51G2Q8NGK0 314 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 SPRYD4Q8WW59 207 aaPredicted RBP11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 TBX5Q99593 518 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 YIPF3Q9GZM5 350 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 YAE1D1Q9NRH1 226 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 ZDHHC8Q9ULC8 765 aa11.71□□□□□ -0.53
TSPAN3-205ENST00000558745 GGT3PA6NGU5 568 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CD300LBA8K4G0 201 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 ENTPD6O75354 484 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CD55P08174 381 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 ANPEPP15144 967 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CA6P23280 308 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 RAD23AP54725 363 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 TMEM33P57088 247 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CXCR4P61073 352 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 RCN1Q15293 331 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 PLEKHG7Q6ZR37 379 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 SSX6Q7RTT6 188 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 SLC35F2Q8IXU6 374 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 ZNF540Q8NDQ6 660 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 OR8J1Q8NGP2 316 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 ZNF420Q8TAQ5 688 aaPredicted RBP11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 HRASLS5Q96KN8 279 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 OR2V2Q96R30 315 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CNN2Q99439 309 aaKnown RBP11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 APOL4Q9BPW4 351 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 LRP12Q9Y561 859 aa11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 SONP18583 2426 aaKnown RBP11.7□□□□□ -0.54
TSPAN3-205ENST00000558745 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 DLGAP1O14490 977 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 CD5LO43866 347 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 TACSTD2P09758 323 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 SBK2P0C263 348 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 PMELP40967 661 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 CDC42P60953 191 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 MRPS11P82912 194 aaKnown RBP11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 FAM3AP98173 230 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 HOXA4Q00056 320 aaPredicted RBP11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 MAB21L1Q13394 359 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 HFEQ30201 348 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 ZMAT1Q5H9K5 638 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 CLDND2Q8NHS1 167 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 REEP6Q96HR9 211 aa11.69□□□□□ -0.54
TSPAN3-205ENST00000558745 OR8B4Q96RC9 309 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms