RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DEFB107AQ8IZN7 70 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 PGAM4Q8N0Y7 254 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 MAP6Q96JE9 813 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
TPM1-211ENST00000558314 ADAT1Q9BUB4 502 aaKnown RBP12.98□□□□□ -0.33
TPM1-211ENST00000558314 PNRC2Q9NPJ4 139 aaKnown RBP12.98□□□□□ -0.33
TPM1-211ENST00000558314 TBC1D23Q9NUY8 699 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 TAGLN3Q9UI15 199 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 hCG_1807616A0A1W2PRN6 198 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 A6NLC8 198 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 TBX1O43435 398 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 IDH3BO43837 385 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 GYPBP06028 91 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 GRPP07492 148 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 OMGP23515 440 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 GYS2P54840 703 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 ZNF92Q03936 586 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 SLC9A3R2Q15599 337 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 C16orf89Q6UX73 402 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 DCXRQ7Z4W1 244 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 OR2T4Q8NH00 348 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 PCGF1Q9BSM1 259 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 UNKLQ9H9P5 680 aaKnown RBP12.97□□□□□ -0.33
TPM1-211ENST00000558314 FN3KRPQ9HA64 309 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 C1orf123Q9NWV4 160 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 RNF7Q9UBF6 113 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 CDH10Q9Y6N8 788 aa12.97□□□□□ -0.33
TPM1-211ENST00000558314 C5orf63A6NC05 138 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 CD300LBA8K4G0 201 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 CCNB2O95067 398 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 ANOS1P23352 680 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 CD200P41217 278 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 GNGT1P63211 74 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 POU4F2Q12837 409 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 ZNF181Q2M3W8 571 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 KRTAP27-1Q3LI81 207 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 GLYATL3Q5SZD4 288 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 WDR25Q64LD2 544 aaPredicted RBP12.96□□□□□ -0.33
TPM1-211ENST00000558314 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 DCDC5Q6ZRR9 648 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 SLC37A3Q8NCC5 494 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 OR6K6Q8NGW6 343 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 OTULINQ96BN8 352 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 BTBD10Q9BSF8 475 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 ZNF747Q9BV97 191 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 TSSK6Q9BXA6 273 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.33
TPM1-211ENST00000558314 CD300AQ9UGN4 299 aa12.96□□□□□ -0.33
TPM1-211ENST00000558314 KIR2DS1A0A191URI9 304 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 HOXA3O43365 443 aaPredicted RBP12.95□□□□□ -0.34
TPM1-211ENST00000558314 ADAM20O43506 726 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 SOX14O95416 240 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 GASTP01350 101 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 RNASE1P07998 156 aaKnown RBP12.95□□□□□ -0.34
TPM1-211ENST00000558314 PSKH1P11801 424 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 ATP6V1B2P21281 511 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 PAX2Q02962 417 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 DEFB112Q30KQ8 113 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 GFOD2Q3B7J2 385 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 GPR157Q5UAW9 335 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 RUSC1-AS1Q66K80 236 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 ZNF826PQ6ZT77 177 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 FITM2Q8N6M3 262 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 ZNF511Q8NB15 262 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 SLAMF6Q96DU3 332 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 ARMC1Q9NVT9 282 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
TPM1-211ENST00000558314 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 COMMD3-BMI1R4GMX3 469 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 U3KQV3 271 aa12.95□□□□□ -0.34
TPM1-211ENST00000558314 C22orf46C9J442 243 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 BHLHE40O14503 412 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 PHYHO14832 338 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 WIPF1O43516 503 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 ENSAO43768 121 aaKnown RBP12.94□□□□□ -0.34
TPM1-211ENST00000558314 KRT36O76013 467 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 GYPAP02724 150 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 ANXA2P07355 339 aaKnown RBP12.94□□□□□ -0.34
TPM1-211ENST00000558314 FMO3P31513 532 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 GATA4P43694 442 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 CRMP1Q14194 572 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 RPL13AP3Q6NVV1 102 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 OR56B2PQ8NGI1 322 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 Q8TCH9 128 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 ERGIC1Q969X5 290 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 MARCH7Q9H992 704 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 NDE1Q9NXR1 346 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms