RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ADGRG5Q8IZF4 528 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 TCTE3Q8IZS6 198 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 LILRB2Q8N423 598 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 TEX29Q8N6K0 151 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 AQP11Q8NBQ7 271 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 MCFD2Q8NI22 146 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 LRRC20Q8TCA0 184 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 UBASH3BQ8TF42 649 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 RORBQ92753 470 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
USP3-208ENST00000558285 SCPEP1Q9HB40 452 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 ABCB10Q9NRK6 738 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 KIF17Q9P2E2 1029 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 LPAR3Q9UBY5 353 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 GDF2Q9UK05 429 aaPredicted RBP7.47□□□□□ -1.21
USP3-208ENST00000558285 PEX16Q9Y5Y5 336 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 HSPE1-MOB4S4R3N1 261 aa7.47□□□□□ -1.21
USP3-208ENST00000558285 LINC00862A6NCI5 91 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 H3BN98 237 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 APOC1P02654 83 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 MMP7P09237 267 aaPredicted RBP7.46□□□□□ -1.22
USP3-208ENST00000558285 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ANXA8P13928 327 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 SELEP16581 610 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ATP6V1B2P21281 511 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 APEX1P27695 318 aaKnown RBP7.46□□□□□ -1.22
USP3-208ENST00000558285 CDAP32320 146 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 CXCR4P61073 352 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 PSG4Q00888 419 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 MALLQ13021 153 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 SCGB2A2Q13296 93 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 SEC23BQ15437 767 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 SYT6Q5T7P8 510 aaPredicted RBP7.46□□□□□ -1.22
USP3-208ENST00000558285 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 PGBD2Q6P3X8 592 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ZNF555Q8NEP9 628 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 PROKR2Q8NFJ6 384 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 OR10G2Q8NGC3 310 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ABHD4Q8TB40 342 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 C10orf105Q8TEF2 133 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 FCGR1BQ92637 280 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 RDH5Q92781 318 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 RPL3LQ92901 407 aaKnown RBP7.46□□□□□ -1.22
USP3-208ENST00000558285 SPTSSAQ969W0 71 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 RASD2Q96D21 266 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 C4orf45Q96LM5 186 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 SYT3Q9BQG1 590 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 DGCR6LQ9BY27 220 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 NARFLQ9H6Q4 476 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 HINT3Q9NQE9 182 aaKnown RBP7.46□□□□□ -1.22
USP3-208ENST00000558285 NKIRAS2Q9NYR9 191 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ZNF224Q9NZL3 707 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 TAAR3PQ9P1P4 343 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ZDHHC8Q9ULC8 765 aa7.46□□□□□ -1.22
USP3-208ENST00000558285 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 METTL15A6NJ78 407 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 H7C1C5 153 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 CTDSP2O14595 271 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 ZNF780AO75290 641 aaPredicted RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 IFNA2P01563 188 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 HMGN1P05114 100 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 PATE4P0C8F1 98 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 ZNF250P15622 560 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 ACHEP22303 614 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 GP2P55259 537 aaKnown RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 TMEM33P57088 247 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 PPP1CBP62140 327 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 LCN6P62502 163 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 GPR50Q13585 617 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 MST1LQ2TV78 715 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 SLC27A4Q6P1M0 643 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 MEX3DQ86XN8 651 aaKnown RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 OR52E2Q8NGJ4 325 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 OR4K13Q8NH42 304 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 OR1F12Q8NHA8 337 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 NABP1Q96AH0 204 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 APOBEC3DQ96AK3 386 aaPredicted RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 ELMOD3Q96FG2 381 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 SAMD8Q96LT4 415 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 ZNF75AQ96N20 296 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 SORCS2Q96PQ0 1159 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 FUZQ9BT04 418 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 TSSK6Q9BXA6 273 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 MRPL37Q9BZE1 423 aaKnown RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 NUAK2Q9H093 628 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 USE1Q9NZ43 259 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 ASH2LQ9UBL3 628 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 DNAJB9Q9UBS3 223 aa7.45□□□□□ -1.22
USP3-208ENST00000558285 COA3Q9Y2R0 106 aaPredicted RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 HEATR1Q9H583 2144 aaKnown RBP7.45□□□□□ -1.22
USP3-208ENST00000558285 TCRBV5S2A0A599 114 aa7.44□□□□□ -1.22
USP3-208ENST00000558285 IFNL4K9M1U5 179 aa7.44□□□□□ -1.22
USP3-208ENST00000558285 TBX1O43435 398 aa7.44□□□□□ -1.22
USP3-208ENST00000558285 SULT1B1O43704 296 aa7.44□□□□□ -1.22
USP3-208ENST00000558285 CD5LO43866 347 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms