RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ATPIF1Q9UII2 106 aa4.24□□□□□ -1.73
SPG11-208ENST00000558155 RIMS3Q9UJD0 308 aa4.24□□□□□ -1.73
SPG11-208ENST00000558155 AURKCQ9UQB9 309 aa4.24□□□□□ -1.73
SPG11-208ENST00000558155 HIF3AQ9Y2N7 669 aa4.24□□□□□ -1.73
SPG11-208ENST00000558155 SF3B6Q9Y3B4 125 aaKnown RBP4.24□□□□□ -1.73
SPG11-208ENST00000558155 A0A1W2PRD5 423 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 A0A1W2PRF3 423 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 A0A1W2PRM7 423 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 ERICH4A6NGS2 130 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 RGS16O15492 202 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 GMDSO60547 372 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SHOX2O60902 331 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 KHDRBS3O75525 346 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 OR5F1O95221 314 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 DUS4LO95620 317 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 DBHP09172 617 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 CD28P10747 220 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 IFI30P13284 250 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 MUC1P15941 1255 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 GRK5P34947 590 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SAA4P35542 130 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 MSX2P35548 267 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 GTF2A1P52655 376 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 COL10A1Q03692 680 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 TMED1Q13445 227 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 BLMHQ13867 455 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 AANATQ16613 207 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 CYP51A1Q16850 503 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 MICBQ29980 383 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 LRRC75BQ2VPJ9 315 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 LRRC10Q5BKY1 277 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 PAGE3Q5JUK9 113 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 ZBTB37Q5TC79 503 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 NCR3LG1Q68D85 454 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 PGAP1Q75T13 922 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SLC36A1Q7Z2H8 476 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 GLB1L2Q8IW92 636 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 LRRC75AQ8NAA5 344 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 PAPD5Q8NDF8 572 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 GJC3Q8NFK1 279 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 OR4D11Q8NGI4 311 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 OR51G2Q8NGK0 314 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 OR51A7Q8NH64 312 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 AENQ8WTP8 325 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 TMEM255BQ8WV15 326 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SLCO4A1Q96BD0 722 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 BPIFA2Q96DR5 249 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SPDL1Q96EA4 605 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 RCC1LQ96I51 464 aaKnown RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 OR52B2Q96RD2 323 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 NKX3-1Q99801 234 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 COQ7Q99807 217 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
SPG11-208ENST00000558155 DCTN5Q9BTE1 182 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 TMEM109Q9BVC6 243 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 NDEL1Q9GZM8 345 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 MEGF9Q9H1U4 602 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 RERGLQ9H628 205 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SIRT7Q9NRC8 400 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 BAG5Q9UL15 447 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 SH3GLB1Q9Y371 365 aa4.23□□□□□ -1.73
SPG11-208ENST00000558155 IGHV3OR15-7A0A075B7D8 119 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 TRBV5-3A0A0A0MS03 114 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 TEX13CA0A0J9YWL9 993 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 hCG_1807616A0A1W2PRN6 198 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 WI2-2373I1.2A0A1W2PRP0 233 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PRSS37A4D1T9 235 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GGT3PA6NGU5 568 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 A6NLC8 198 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CD300LBA8K4G0 201 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 F5H5K5 113 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 H3BUI4 141 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 M0R1W7 72 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 RER1O15258 196 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 SLC16A7O60669 478 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GLCEO94923 617 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PTBP3O95758 552 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 CLIC3O95833 236 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 LHBP01229 141 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 LCATP04180 440 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GRPP07492 148 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CCDC159P0C7I6 412 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PF4V1P10720 104 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 NAT1P18440 290 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 CA6P23280 308 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 POU1F1P28069 291 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GGT2P36268 569 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 RPL4P36578 427 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 NAA10P41227 235 aaPredicted RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 SLC9A3P48764 834 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 MRPL19P49406 292 aaKnown RBP4.22□□□□□ -1.73
SPG11-208ENST00000558155 CENPAP49450 140 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 GSK3BP49841 420 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 SLC35A2P78381 396 aa4.22□□□□□ -1.73
SPG11-208ENST00000558155 PRB3Q04118 309 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms