RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HKR1P10072 659 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 CA6P23280 308 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 PMELP40967 661 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 PAX2Q02962 417 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 MAB21L1Q13394 359 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 PRAMEF6Q5VXH4 476 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 CYP2R1Q6VVX0 501 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 NAA40Q86UY6 237 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 OR10S1Q8NGN2 331 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 SLC25A28Q96A46 364 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 UPRTQ96BW1 309 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 BTBD10Q9BSF8 475 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 MMADHCQ9H3L0 296 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-235ENST00000557740 FN3KRPQ9HA64 309 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 SPARCP09486 303 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 RPS27P42677 84 aaKnown RBP12.22□□□□□ -0.45
SHMT2-235ENST00000557740 MNAT1P51948 309 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 GNGT1P63211 74 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 TAF13Q15543 124 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 SNAI3Q3KNW1 292 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 LYPD4Q6UWN0 246 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 DRAM2Q6UX65 266 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 RASSF6Q6ZTQ3 369 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 DCXRQ7Z4W1 244 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 OR51L1Q8NGJ5 315 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 OR2AE1Q8NHA4 323 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF48Q96MX3 618 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-235ENST00000557740 NUDT16L1Q9BRJ7 211 aaKnown RBP12.22□□□□□ -0.45
SHMT2-235ENST00000557740 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 PCDHGB1Q9Y5G3 927 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 COMMD3-BMI1R4GMX3 469 aa12.22□□□□□ -0.45
SHMT2-235ENST00000557740 KIR2DS1A0A191URI9 304 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ENSAO43768 121 aaKnown RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 GMDSO60547 372 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 EGR1P18146 543 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ATP6V1B2P21281 511 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 FMO3P31513 532 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ENTPD1P49961 510 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 HMGA2P52926 109 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF92Q03936 586 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 MPPED2Q15777 294 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 GLYATL3Q5SZD4 288 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 LYPD2Q6UXB3 125 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 C9orf139Q6ZV77 190 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 BOLLQ8N9W6 283 aaKnown RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 AQP11Q8NBQ7 271 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 SLC37A3Q8NCC5 494 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 C19orf18Q8NEA5 215 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 OR8D4Q8NGM9 314 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 DACT3Q96B18 629 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 TECTBQ96PL2 329 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF747Q9BV97 191 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 TSSK6Q9BXA6 273 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 IL20Q9NYY1 176 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 MRPL15Q9P015 296 aaKnown RBP12.21□□□□□ -0.45
SHMT2-235ENST00000557740 ACTR3BQ9P1U1 418 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 KIF17Q9P2E2 1029 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 BAIAP2Q9UQB8 552 aa12.21□□□□□ -0.45
SHMT2-235ENST00000557740 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-235ENST00000557740 RIIAD1A6NNX1 92 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 CLDN34H7C241 214 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 SOX14O95416 240 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 PLATP00750 562 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 GASTP01350 101 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 IFNGP01579 166 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 GYPBP06028 91 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 OTX1P32242 354 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-235ENST00000557740 MAGEA2P43356 314 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 PRKXP51817 358 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 FGF12P61328 243 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 MZT1Q08AG7 82 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 CRMP1Q14194 572 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 OR8B8Q15620 311 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF770Q6IQ21 691 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-235ENST00000557740 SHISA2Q6UWI4 295 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 LNX2Q8N448 690 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 OR2T33Q8NG76 320 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 OR56B2PQ8NGI1 322 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 OR6K6Q8NGW6 343 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 SLAMF6Q96DU3 332 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 DDOQ99489 341 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 TRIM36Q9NQ86 728 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 CENPMQ9NSP4 180 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 N6AMT1Q9Y5N5 214 aa12.2□□□□□ -0.46
SHMT2-235ENST00000557740 A6NLC8 198 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 C22orf46C9J442 243 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF878C9JN71 531 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 LGALS8O00214 317 aa12.19□□□□□ -0.46
SHMT2-235ENST00000557740 XRCC2O43543 280 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms