RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MMP9P14780 707 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 CA6P23280 308 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 SLC6A6P31641 620 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 CFHR2P36980 270 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 RAG2P55895 527 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 TPTEP56180 551 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 RUSC1-AS1Q66K80 236 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 OR4F5Q8NH21 305 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 SPRYD4Q8WW59 207 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-224ENST00000557713 MAP6Q96JE9 813 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 FAM71F1Q96KD3 344 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-224ENST00000557713 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 CCDC134Q9H6E4 229 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 MRPL22Q9NWU5 206 aaKnown RBP13.23□□□□□ -0.29
SCFD1-224ENST00000557713 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 DOCK11Q5JSL3 2073 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 LGALS8O00214 317 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 IDH3BO43837 385 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 GMDSO60547 372 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 CCDC22O60826 627 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 TOX4O94842 621 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 CRYBA1P05813 215 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 NUDT2P50583 147 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 PSME3P61289 254 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 KRT72Q14CN4 511 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 OR8G1Q15617 311 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 KCNJ8Q15842 424 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 MIDNQ504T8 468 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 OLFML2AQ68BL7 652 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 SFRP4Q6FHJ7 346 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-224ENST00000557713 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 FANK1Q8TC84 345 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 TECTBQ96PL2 329 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 CITED1Q99966 193 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 FN3KRPQ9HA64 309 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 SAMD4AQ9UPU9 718 aaKnown RBP13.22□□□□□ -0.29
SCFD1-224ENST00000557713 POMT1Q9Y6A1 747 aa13.22□□□□□ -0.29
SCFD1-224ENST00000557713 CLPSL1A2RUU4 121 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 NDUFA2O43678 99 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 SEMG1P04279 462 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 ANOS1P23352 680 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 SMIM11AP58511 58 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 ZNF92Q03936 586 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 SNAI3Q3KNW1 292 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 MRPL21Q7Z2W9 205 aaKnown RBP13.21□□□□□ -0.29
SCFD1-224ENST00000557713 WDFY2Q96P53 400 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 DDOQ99489 341 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 SIRPDQ9H106 197 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 MMADHCQ9H3L0 296 aaPredicted RBP13.21□□□□□ -0.29
SCFD1-224ENST00000557713 FN3KQ9H479 309 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 GORASP2Q9H8Y8 452 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 KCNG2Q9UJ96 466 aa13.21□□□□□ -0.29
SCFD1-224ENST00000557713 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
SCFD1-224ENST00000557713 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 C3orf80F5H4A9 247 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 M0R135 149 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 ADAM20O43506 726 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 FCN3O75636 299 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 GADD45GO95257 159 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 NOS3P29474 1203 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 OTX1P32242 354 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-224ENST00000557713 GSSP48637 474 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 KRTAP10-3P60369 221 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 ZNF620Q6ZNG0 422 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 BOLLQ8N9W6 283 aaKnown RBP13.2□□□□□ -0.3
SCFD1-224ENST00000557713 PNLDC1Q8NA58 520 aaKnown RBP13.2□□□□□ -0.3
SCFD1-224ENST00000557713 SDR9C7Q8NEX9 313 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 OR2AE1Q8NHA4 323 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 SPTSSAQ969W0 71 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 ZNF799Q96GE5 643 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 PYURFQ96I23 114 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 ADAT1Q9BUB4 502 aaKnown RBP13.2□□□□□ -0.3
SCFD1-224ENST00000557713 TRIM36Q9NQ86 728 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 ACOXLQ9NUZ1 547 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 MRPL15Q9P015 296 aaKnown RBP13.2□□□□□ -0.3
SCFD1-224ENST00000557713 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
SCFD1-224ENST00000557713 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 IGHV1-69DA0A0B4J2H0 117 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 OOEPA6NGQ2 149 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 OR10H3O60404 316 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 LHBP01229 141 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 IGHV1-69P01742 117 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
SCFD1-224ENST00000557713 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCFD1-224ENST00000557713 PDCD1Q15116 288 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 OR8B8Q15620 311 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 GCSAMQ8N6F7 178 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 TBC1D15Q8TC07 691 aa13.19□□□□□ -0.3
SCFD1-224ENST00000557713 ZNRF4Q8WWF5 429 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms