RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TREM2Q9NZC2 230 aa14.14□□□□□ -0.15
NEK9-211ENST00000557673 PNPP00491 289 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 MRPL3P09001 348 aaKnown RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 DBHP09172 617 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 UCP2P55851 309 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 HILS1P60008 231 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 ADARB1P78563 741 aaKnown RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 ECH1Q13011 328 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 EIF2B1Q14232 305 aaKnown RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 NKPD1Q17RQ9 610 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 SLC25A30Q5SVS4 291 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 TMEM154Q6P9G4 183 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 SHFQ7M4L6 423 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 SLC16A9Q7RTY1 509 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 PEG10Q86TG7 708 aaKnown RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 OTOSQ8NHW6 89 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 RFKQ969G6 155 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 SLAMF6Q96DU3 332 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 AMELYQ99218 206 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 ABHD6Q9BV23 337 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 ADGRL4Q9HBW9 690 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 ZNF275Q9NSD4 429 aaPredicted RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 HAO2Q9NYQ3 351 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 H2AFY2Q9P0M6 372 aaPredicted RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 WARS2Q9UGM6 360 aaKnown RBP14.13□□□□□ -0.15
NEK9-211ENST00000557673 KLHDC2Q9Y2U9 406 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 DYSFO75923 2080 aa14.13□□□□□ -0.15
NEK9-211ENST00000557673 ZNF878C9JN71 531 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 MPZL2O60487 215 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 ABHD16AO95870 558 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 ZNF250P15622 560 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 EGR1P18146 543 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 OTX1P32242 354 aaPredicted RBP14.12□□□□□ -0.15
NEK9-211ENST00000557673 RAD52P43351 418 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 KLF3P57682 345 aaPredicted RBP14.12□□□□□ -0.15
NEK9-211ENST00000557673 OCLNQ16625 522 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 ZNF691Q5VV52 312 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 TTC23Q5W5X9 447 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 DHRSXQ8N5I4 330 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 ZNF454Q8N9F8 522 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 OR1J1Q8NGS3 322 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 SYNPRQ8TBG9 265 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 RNF133Q8WVZ7 376 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 DCLRE1CQ96SD1 692 aaKnown RBP14.12□□□□□ -0.15
NEK9-211ENST00000557673 APOL4Q9BPW4 351 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 SUCNR1Q9BXA5 334 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 BCL2L14Q9BZR8 327 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 YIPF3Q9GZM5 350 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 TAAR3PQ9P1P4 343 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 MGAM2Q2M2H8 2515 aa14.12□□□□□ -0.15
NEK9-211ENST00000557673 IGLV3-9A0A075B6K5 115 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 H0YAE9 185 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 ENTPD6O75354 484 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 NCR1O76036 304 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 CLIC3O95833 236 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 LYNP07948 512 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 EPHA1P21709 976 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 CAPGP40121 348 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 AQP4P55087 323 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 LMO4P61968 165 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 POU4F2Q12837 409 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 TMED1Q13445 227 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 PCGF3Q3KNV8 242 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 SPATA46Q5T0L3 261 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 MEDAGQ5VYS4 303 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 RHOXF1Q8NHV9 184 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 ABHD4Q8TB40 342 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 APH1BQ8WW43 257 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 C4orf45Q96LM5 186 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 COPS4Q9BT78 406 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 VCX3BQ9H321 246 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 AASSQ9UDR5 926 aa14.11□□□□□ -0.15
NEK9-211ENST00000557673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.11□□□□□ -0.15
NEK9-211ENST00000557673 A0A0G2JMP0 313 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 A0A0X1KG70 313 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 H0YJX3 145 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 J3QW42 95 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 RGS9O75916 674 aaPredicted RBP14.1□□□□□ -0.15
NEK9-211ENST00000557673 SBK2P0C263 348 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 ACSM4P0C7M7 580 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 ALOX5APP20292 161 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 OPRL1P41146 370 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 IL18R1Q13478 541 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 RSPO1Q2MKA7 263 aaPredicted RBP14.1□□□□□ -0.15
NEK9-211ENST00000557673 SPATC1Q76KD6 591 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 SLC35F2Q8IXU6 374 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 SETD9Q8NE22 299 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 OR4M2Q8NGB6 313 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 OR51G2Q8NGK0 314 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 SNX33Q8WV41 574 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 IPCEF1Q8WWN9 437 aaPredicted RBP14.1□□□□□ -0.15
NEK9-211ENST00000557673 GTF3AQ92664 365 aaKnown RBP14.1□□□□□ -0.15
NEK9-211ENST00000557673 YIPF5Q969M3 257 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 RAB39BQ96DA2 213 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 ELOVL3Q9HB03 270 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 TBCCD1Q9NVR7 557 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 EIF3KQ9UBQ5 218 aaKnown RBP14.1□□□□□ -0.15
NEK9-211ENST00000557673 LAMP5Q9UJQ1 280 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 COPS3Q9UNS2 423 aa14.1□□□□□ -0.15
NEK9-211ENST00000557673 PRR32B1ATL7 298 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms