RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SLC9A3R2Q15599 337 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TPSAB1Q15661 275 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ATP6AP1Q15904 470 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PRR4Q16378 134 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 Q1RN00 199 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C15orf32Q32M92 178 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM176BQ3YBM2 270 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR2G6Q5TZ20 316 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DMKNQ6E0U4 476 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 LAMTOR1Q6IAA8 161 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SCIMPQ6UWF3 145 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM144Q7Z5S9 345 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PAQR7Q86WK9 346 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ANGPTL5Q86XS5 388 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NRMQ8IXM6 262 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SYS1Q8N2H4 156 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ACOT4Q8N9L9 421 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CDRT4Q8N9R6 151 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR5D13Q8NGL4 314 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ITFG1Q8TB96 612 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FAM172AQ8WUF8 416 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SELENOMQ8WWX9 145 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DNAJC9Q8WXX5 260 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MAFIPQ8WZ33 124 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CMTM7Q96FZ5 175 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SH3YL1Q96HL8 342 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PPP3R2Q96LZ3 170 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NOL4LQ96MY1 436 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TM6SF2Q9BZW4 377 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 COMMD4Q9H0A8 199 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GPN2Q9H9Y4 310 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 POPDC2Q9HBU9 364 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SLC25A19Q9HC21 320 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MYOZ2Q9NPC6 264 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CUTCQ9NTM9 273 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 VAPAQ9P0L0 249 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PAK5Q9P286 719 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 P2RX2Q9UBL9 471 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SAMD4AQ9UPU9 718 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FOXJ3Q9UPW0 622 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SLC17A4Q9Y2C5 497 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GSTK1Q9Y2Q3 226 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 EXOSC1Q9Y3B2 195 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PTPRJQ12913 1337 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ATP10BO94823 1461 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ERVK-7P63135 1459 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 EIF4G3O43432 1585 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 KDM3BQ7LBC6 1761 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ATG2AQ2TAZ0 1938 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GW15 77 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FRG2CA6NGY1 282 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PSMD12O00232 456 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CDC7O00311 574 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BCKDKO14874 412 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RNF13O43567 381 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CHP2O43745 196 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SDC3O75056 442 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BANF1O75531 89 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TM7SF2O76062 418 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DUS4LO95620 317 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IFNA21P01568 189 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IFNA5P01569 189 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RPN2P04844 631 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UBCP0CG48 685 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ADORA3P0DMS8 318 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RRASP10301 218 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OGNP20774 298 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IMPDH1P20839 514 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GATA2P23769 480 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GDF1P27539 372 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MAGEA3P43357 314 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IDH2P48735 452 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TDGF1P3P51864 188 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BLMP54132 1417 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RND3P61587 244 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RPS27AP62979 156 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 KRR1Q13601 381 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TNXAQ16473 311 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 COX19Q49B96 90 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 XKR7Q5GH72 579 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C1orf220Q5T0J3 134 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PAQR6Q6TCH4 344 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 Q6ZSR3 168 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 XIRP1Q702N8 1843 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CENPUQ71F23 418 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SSH2Q76I76 1423 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SUPT6HQ7KZ85 1726 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SLC36A1Q7Z2H8 476 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UNC93AQ86WB7 457 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 APOBEC3FQ8IUX4 373 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BOD1L2Q8IYS8 172 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C15orf54Q8N8G6 183 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR9A4Q8NGU2 314 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR11L1Q8NGX0 322 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR51F2Q8NH61 342 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR51A7Q8NH64 312 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR4S2Q8NH73 311 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 KCNG3Q8TAE7 436 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RHEBL1Q8TAI7 183 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TBCKQ8TEA7 893 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms