RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 TVP23CQ96ET8 276 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TEX101Q9BY14 249 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZCCHC4Q9H5U6 513 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 CNTD2Q9H8S5 307 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 DUSP22Q9NRW4 184 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 A0A1W2PPV9 198 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 CDC14BO60729 498 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 RFC3P40938 356 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 NPBWR1P48145 328 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 HOXA1P49639 335 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MESTQ5EB52 335 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 NHLRC3Q5JS37 347 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TMPPEQ6ZT21 453 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR11G2Q8NGC1 345 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 NUBPLQ8TB37 319 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PTP4A1Q93096 173 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MRPL38Q96DV4 380 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TOE1Q96GM8 510 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 UQCC1Q9NVA1 299 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MRPS18AQ9NVS2 196 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MTCH1Q9NZJ7 389 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 DHCR7Q9UBM7 475 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 B9D1Q9UPM9 204 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SHISA3A0PJX4 238 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 A6NLC8 198 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 C4orf51C9J302 202 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 HS3ST1O14792 307 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZGLP1P0C6A0 271 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 BTCP35070 178 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 DVL1P1P54792 670 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ADPRHP54922 357 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PIGPP57054 158 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 HTRA3P83110 453 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SSBP1Q04837 148 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 FMODQ06828 376 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 GUK1Q16774 197 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ANKRD16Q6P6B7 361 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 LDLRAD3Q86YD5 345 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MRPL43Q8N983 215 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 C16orf52Q8NHV5 167 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OTOSQ8NHW6 89 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SGK3Q96BR1 496 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 NIPSNAP3BQ9BS92 247 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PAPOLGQ9BWT3 736 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SAMD10Q9BYL1 202 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 LAT2Q9GZY6 243 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MAGT1Q9H0U3 335 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 FGF22Q9HCT0 170 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 CTSFQ9UBX1 484 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM184BQ9Y519 407 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OTOFQ9HC10 1997 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ABCD4O14678 606 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 GPR37O15354 613 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 FOSL1P15407 271 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 FPR2P25090 351 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 HTR5AP47898 357 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 RAG2P55895 527 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF121P58317 390 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 NANOS3P60323 173 aaKnown RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZXDCQ2QGD7 858 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM255AQ5JRV8 349 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PRAMEF20Q5VT98 475 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 KIAA0895LQ68EN5 471 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PLXDC2Q6UX71 529 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TMPRSS11FQ6ZWK6 438 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR13H1Q8NG92 308 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR6S1Q8NH40 331 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 AKR7LQ8NHP1 331 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TSLPQ969D9 159 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PGLYRP3Q96LB9 341 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 DEFB126Q9BYW3 111 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 NMES1Q9C002 83 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 VN1R1Q9GZP7 353 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 LDAHQ9H6V9 325 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 MED29Q9NX70 200 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OPN4Q9UHM6 478 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ACAD8Q9UKU7 415 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PPP1R3CQ9UQK1 317 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OSGIN2Q9Y236 505 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF646O15015 1829 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TRAV8-7A0A075B6U6 113 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 A0A087WZY1 265 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CEBPZOSA8MTT3 80 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PRAMEF26H0Y7S4 382 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TP53I11O14683 189 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 PLRG1O43660 514 aaKnown RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 TBX19O60806 448 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 SYNGR4O95473 234 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 H2AFB1P0C5Y9 115 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 GLULP15104 373 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF133P52736 654 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-223ENST00000557005 CRYBA2P53672 197 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 OR1D5P58170 312 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF117Q03924 483 aa4.48□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF528Q3MIS6 628 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms