RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OR56B1Q8NGI3 324 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 LMX1AQ8TE12 382 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM239Q8WW34 195 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 OSTF1Q92882 214 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 KISS1RQ969F8 398 aaPredicted RBP4.58□□□□□ -1.68
TMEM260-210ENST00000556422 TCTN2Q96GX1 697 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 SLC38A3Q99624 504 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 SDHCQ99643 169 aaPredicted RBP4.58□□□□□ -1.68
TMEM260-210ENST00000556422 SLC6A7Q99884 636 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 OR10A5Q9H207 317 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 ARV1Q9H2C2 271 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 OR52D1Q9H346 318 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 SEBOXQ9HB31 216 aaPredicted RBP4.58□□□□□ -1.68
TMEM260-210ENST00000556422 CACYBPQ9HB71 228 aaKnown RBP4.58□□□□□ -1.68
TMEM260-210ENST00000556422 SIDT1Q9NXL6 827 aaKnown RBP4.58□□□□□ -1.68
TMEM260-210ENST00000556422 COMMD3Q9UBI1 195 aa4.58□□□□□ -1.68
TMEM260-210ENST00000556422 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ANKUB1A6NFN9 424 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 A6NNC1 897 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 C4orf47A7E2U8 309 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF670-ZNF695F2Z2N8 137 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 EREGO14944 169 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 RCBTB2O95199 551 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 SCGB1D1O95968 90 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 IGHA1P01876 353 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 DAOP14920 347 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 IL9P15248 144 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 SLC2A5P22732 501 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 AZGP1P25311 298 aaKnown RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 CASRP41180 1078 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ETV6P41212 452 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 WNT4P56705 351 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 CFHR1Q03591 330 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 PRKCDQ05655 676 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 DEFB133Q30KQ1 61 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 NKAIN2Q5VXU1 208 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 LINC00696Q6ZRV3 163 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 LANCL3Q6ZV70 420 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 METTL27Q8N6F8 245 aaPredicted RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 AMER2Q8N7J2 671 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 OR2T33Q8NG76 320 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 OR13C9Q8NGT0 318 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 COQ8AQ8NI60 647 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ARHGAP9Q9BRR9 750 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 WWTR1Q9GZV5 400 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ISYNA1Q9NPH2 558 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 KLHL21Q9UJP4 597 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 SIGLEC7Q9Y286 467 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 MRPS18BQ9Y676 258 aaKnown RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ALPK2Q86TB3 2170 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 NCOR1O75376 2440 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 FITM1A5D6W6 292 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 LMO7DNF2Z398 122 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TP53I11O14683 189 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 MYL12BO14950 172 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 PRKNO60260 465 aaPredicted RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 MT-CO2P00403 227 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 IFNA17P01571 189 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 F13BP05160 661 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 OR8U9P0C7N5 309 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 OR3A1P47881 315 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 CTBP2P56545 445 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 RIPPLY3P57055 190 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM33P57088 247 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 FUT7Q11130 342 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ECH1Q13011 328 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 UBXN2BQ14CS0 331 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 NNATQ16517 81 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TIMM50Q3ZCQ8 353 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 COX19Q49B96 90 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 LINC00114Q6XXX2 140 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 B3GLCTQ6Y288 498 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 H1FNTQ75WM6 255 aaPredicted RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 CCDC190Q86UF4 302 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 SVBPQ8N300 66 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 JAGN1Q8N5M9 183 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 PARP16Q8N5Y8 322 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF615Q8N8J6 731 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 CADM4Q8NFZ8 388 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 OR14A16Q8NHC5 309 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 C16orf52Q8NHV5 167 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 RNF170Q96K19 258 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 POM121L2Q96KW2 1035 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 HSPA12BQ96MM6 686 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 GUCD1Q96NT3 240 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 FOXN4Q96NZ1 517 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 MED20Q9H944 212 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TXNL4BQ9NX01 149 aaKnown RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 METTL1Q9UBP6 276 aaKnown RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 WNT16Q9UBV4 365 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TRAV25A0A0B4J276 109 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 A0A1B0GUH1 482 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 A0A1B0GWA3 101 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 ZC3H12DA2A288 527 aaKnown RBP4.57□□□□□ -1.68
TMEM260-210ENST00000556422 TLCD2A6NGC4 264 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 AGRPO00253 132 aa4.57□□□□□ -1.68
TMEM260-210ENST00000556422 LANCL1O43813 399 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms