RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CAPZA1P52907 286 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 C3AR1Q16581 482 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 TBR1Q16650 682 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 C2orf76Q3KRA6 126 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 KRTAP27-1Q3LI81 207 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 DRAM2Q6UX65 266 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF627Q7L945 461 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF554Q86TJ5 538 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 OR1M1Q8NGA1 313 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF799Q96GE5 643 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 NEDD4LQ96PU5 975 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 TMEM138Q9NPI0 162 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 RBFOX1Q9NWB1 397 aaKnown RBP12.89□□□□□ -0.35
VPS33B-205ENST00000556096 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
VPS33B-205ENST00000556096 OR6C6A6NF89 314 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 EEF1E1O43324 174 aaKnown RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 LYRM1O43325 122 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 LANCL1O43813 399 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 FARS2O95363 451 aaKnown RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF20P17024 532 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF32P17041 273 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 GNALP38405 381 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 POU3F4P49335 361 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 MRPS10P82664 201 aaKnown RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 PMP22Q01453 160 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SPOCK1Q08629 439 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 GLYATL3Q5SZD4 288 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF57Q68EA5 555 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 NAA40Q86UY6 237 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 NEURL2Q9BR09 285 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF587BE7ETH6 402 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 RAB3AP20336 220 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 PTH2RP49190 550 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 TPTEP56180 551 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 COMMD2Q86X83 199 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 OR14K1Q8NGZ2 314 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SNRNP27Q8WVK2 155 aaKnown RBP12.88□□□□□ -0.35
VPS33B-205ENST00000556096 APH1AQ96BI3 265 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SORCS2Q96PQ0 1159 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 UQCC2Q9BRT2 126 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 RHBDD3Q9Y3P4 386 aa12.88□□□□□ -0.35
VPS33B-205ENST00000556096 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 E9PLN8 166 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 XRCC3O43542 346 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 MMP7P09237 267 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-205ENST00000556096 FAM157BP0CG42 384 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 FCGR2AP12318 317 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 ANOS1P23352 680 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 CDK2P24941 298 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 RANBP1P43487 201 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 KIR2DL3P43628 341 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 SLC6A9P48067 706 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 DGCR2P98153 550 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 PSG4Q00888 419 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 SLC36A2Q495M3 483 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 TMEM69Q5SWH9 247 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF774Q6NX45 483 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 CELF2-AS1Q8N7Q2 184 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 ENKURQ8TC29 256 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 CHAC2Q8WUX2 184 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 PTX4Q96A99 478 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 FAM71F1Q96KD3 344 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-205ENST00000556096 LYZL4Q96KX0 146 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 WNT5BQ9H1J7 359 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 PLEKHA1Q9HB21 404 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-205ENST00000556096 ATPIF1Q9UII2 106 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 V9GYS6 101 aa12.87□□□□□ -0.35
VPS33B-205ENST00000556096 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 KMT2BQ9UMN6 2715 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-205ENST00000556096 GABARAPH6UMI1 98 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 AQP7O14520 342 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 LDLRAD4O15165 306 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 IGHV3-9P01782 118 aa12.86□□□□□ -0.35
VPS33B-205ENST00000556096 ALDOBP05062 364 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms