RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TOX4O94842 621 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LHBP01229 141 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SEMG1P04279 462 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 COX4I1P13073 169 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RHCEP18577 417 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CRABP1P29762 137 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 NPY4RP50391 375 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RFX4Q33E94 735 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FGD3Q5JSP0 725 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 BRICD5Q6PL45 260 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SMARCD3Q6STE5 483 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LYPD4Q6UWN0 246 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNF620Q6ZNG0 422 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ARPINQ7Z6K5 226 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LDLRAD3Q86YD5 345 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FAM90A1Q86YD7 464 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 C11orf53Q8IXP5 236 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR2AE1Q8NHA4 323 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RP9Q8TA86 221 aaKnown RBP11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PITX2Q99697 317 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ATF6BQ99941 703 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MMP27Q9H306 513 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR52D1Q9H346 318 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FN3KQ9H479 309 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ACOXLQ9NUZ1 547 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ADA2Q9NZK5 511 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ABCD2Q9UBJ2 740 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 AP3M1Q9Y2T2 418 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 A0A1B0GW55 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 TSPAN15O95858 294 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LCATP04180 440 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 TROVE2P10155 538 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 H2AFXP16104 143 aaPredicted RBP11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 IER3P46695 156 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CENPAP49450 140 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RPS6KA3P51812 740 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 C17orf107Q6ZR85 190 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RRM2BQ7LG56 351 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR52J3Q8NH60 311 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SSMEM1Q8WWF3 244 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DYRK2Q92630 601 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RPRD1BQ9NQG5 326 aaKnown RBP11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RNF114Q9Y508 228 aa11.84□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 M0R135 149 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ADAM20O43506 726 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 GYPAP02724 150 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 LIPFP07098 398 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 IRF2P14316 349 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 RPL15P61313 204 aaKnown RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ARF6P62330 175 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 POU4F2Q12837 409 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ECH1Q13011 328 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 OR8G1Q15617 311 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 TAF9Q16594 264 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 GLYATL3Q5SZD4 288 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 Q6ZSV7 163 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 HDXQ7Z353 690 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ZSCAN4Q8NAM6 433 aaPredicted RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 PLPP7Q8NBV4 271 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 OR11L1Q8NGX0 322 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 LHX4Q969G2 390 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ZNF799Q96GE5 643 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 CCT8L2Q96SF2 557 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 HOPXQ9BPY8 73 aaPredicted RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 NDEL1Q9GZM8 345 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 MMADHCQ9H3L0 296 aaPredicted RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 FN3KRPQ9HA64 309 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 DCAF13Q9NV06 445 aaKnown RBP11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 ERVK-18Q9QC07 812 aa11.83□□□□□ -0.52
CHMP4BP1-201ENST00000556017 OOEPA6NGQ2 149 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 M0QZ24 198 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 DVL1O14640 695 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 GSTA4O15217 222 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 PLXNB1O43157 2135 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 OR10H3O60404 316 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 GMDSO60547 372 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 CRYBA1P05813 215 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 AMY2BP19961 511 aa11.82□□□□□ -0.52
CHMP4BP1-201ENST00000556017 GSSP48637 474 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms