RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SLC25A5P05141 298 aaKnown RBP6.27□□□□□ -1.4
SYNE2-216ENST00000555002 CCR7P32248 378 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 PCBP4P57723 403 aaKnown RBP6.27□□□□□ -1.4
SYNE2-216ENST00000555002 SNRPGP62308 76 aaKnown RBP6.27□□□□□ -1.4
SYNE2-216ENST00000555002 CLN3Q13286 438 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 KEAP1Q14145 624 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 COX20Q5RI15 118 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF691Q5VV52 312 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 GDPGP1Q6ZNW5 385 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 MYPOPQ86VE0 399 aaPredicted RBP6.27□□□□□ -1.4
SYNE2-216ENST00000555002 OR4D10Q8NGI6 311 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 OR1B1Q8NGR6 318 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 UBALD1Q8TB05 177 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 RPL3LQ92901 407 aaKnown RBP6.27□□□□□ -1.4
SYNE2-216ENST00000555002 M0R082 166 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 FZD9O00144 591 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 NDUFB3O43676 98 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 QDPRP09417 244 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ACSM4P0C7M7 580 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 OPRK1P41145 380 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 OR2B8PP59922 312 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 BCL7AQ4VC05 210 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 FAM162BQ5T6X4 162 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 LHFPL2Q6ZUX7 228 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM116Q8NCL8 245 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 HSD17B10Q99714 261 aaKnown RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 GYPAP02724 150 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SRMP19623 302 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 FCGR2CP31995 323 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SULT1A1P50225 295 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 MLLT11Q13015 90 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 VMA21Q3ZAQ7 101 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF260Q3ZCT1 412 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 BCDIN3DQ7Z5W3 292 aaKnown RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SLC39A11Q8N1S5 342 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 MARC2Q969Z3 335 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 PRSS16Q9NQE7 514 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 A0A1W2PNV4 684 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CLEC18AA5D8T8 446 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ARNTP27540 789 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 Q3ZCU0 254 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SLC35E4Q6ICL7 350 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CLEC18CQ8NCF0 446 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 KCNE4Q8WWG9 221 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 KLK4Q9Y5K2 254 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 MPDZO75970 2070 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 COL2A1P02458 1487 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TGOLN2O43493 480 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 PSMB1P20618 241 aaKnown RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 Q499Y3 187 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ADAM5Q6NVV9 412 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TOMM20LQ6UXN7 152 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TBC1D26Q86UD7 250 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 KLF16Q9BXK1 252 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TREM2Q9NZC2 230 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF487B1APH4 448 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF195O14628 629 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 MYF5P13349 255 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 C11orf91Q3C1V1 193 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CLEC9AQ6UXN8 241 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM135Q86UB9 458 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CHRDL1Q9BU40 450 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF71Q9NQZ8 489 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CORINQ9Y5Q5 1042 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZGRF1Q86YA3 2104 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 BMP2P12643 396 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 FABP4P15090 132 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 PPP1CBP62140 327 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SARAFQ96BY9 339 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 POLDIP2Q9Y2S7 368 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SPATA31D1Q6ZQQ2 1576 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 OTPQ5XKR4 325 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 OR6M1Q8NGM8 313 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 WBP2Q969T9 261 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 TAF1P21675 1872 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 G3V2L1 256 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 GPRIN2O60269 458 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF865P0CJ78 1059 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 GALNT16Q8N428 558 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 COMMD1Q8N668 190 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 OR2I1PQ8NGU4 316 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 EVA1AQ9H8M9 152 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 SEBOXQ9HB31 216 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-216ENST00000555002 GPR84Q9NQS5 396 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 MOKQ9UQ07 419 aa6.27□□□□□ -1.41
SYNE2-216ENST00000555002 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
SYNE2-216ENST00000555002 H7C2G1 150 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 M0R1X1 148 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 LRP3O75074 770 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 PMS2P2O95744 297 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 IL5P05113 134 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SBK2P0C263 348 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 HTR1DP28221 377 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 SLC6A12P48065 614 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 IQCJQ1A5X6 159 aa6.26□□□□□ -1.41
SYNE2-216ENST00000555002 RHOUQ7L0Q8 258 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms