RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TRAPPC6AO75865 159 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SNAPC5O75971 98 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 RPP14O95059 124 aaKnown RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 PAHP00439 452 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF823P16415 610 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ACHEP22303 614 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 GDF1P27539 372 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 CEACAM8P31997 349 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 EIF1P41567 113 aaKnown RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SLC17A1Q14916 467 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 CDK10Q15131 360 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 CCDC92Q53HC0 331 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 TEX30Q5JUR7 227 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 CD276Q5ZPR3 534 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 TMEM81Q6P7N7 255 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 STAC2Q6ZMT1 411 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF704Q6ZNC4 412 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 LINGO2Q7L985 606 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 DPY19L4Q7Z388 723 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 KRT77Q7Z794 578 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 LUZP2Q86TE4 346 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ADGRG3Q86Y34 549 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF433Q8N7K0 673 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 NKAIN3Q8N8D7 197 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ASCC1Q8N9N2 400 aaKnown RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 OR56B4Q8NH76 319 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 RNF128Q8TEB7 428 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 THEM6Q8WUY1 208 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ASB10Q8WXI3 467 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SARAFQ96BY9 339 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF587Q96SQ5 575 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 MED28Q9H204 178 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 MOB1AQ9H8S9 216 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SRA1Q9HD15 236 aaKnown RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SH2D2AQ9NP31 389 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ZFP64Q9NPA5 681 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 TAS2R5Q9NYW4 299 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 NUFIP1Q9UHK0 495 aaKnown RBP9.79□□□□□ -0.84
SHMT2-216ENST00000554975 N6AMT1Q9Y5N5 214 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 WIF1Q9Y5W5 379 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 A0A087WZY1 265 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 A0A0A6YYH2 397 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 TRGV5A0A0B4J1U4 118 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 A0A0B4J293 547 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 A0A1B0GVI7 797 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 SLC22A23A1A5C7 686 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 TVP23AA6NH52 213 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 A6NJ64 397 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 FTCDNL1E5RQL4 147 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 H7C1C5 153 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 AQP8O94778 261 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 AKR7A3O95154 331 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 SPARCP09486 303 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 RFPL3SP0C7P2 107 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 UBCP0CG48 685 aaKnown RBP9.78□□□□□ -0.84
SHMT2-216ENST00000554975 ANXA3P12429 323 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 GABRA1P14867 456 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 HCCSP53701 268 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 NANOS3P60323 173 aaKnown RBP9.78□□□□□ -0.84
SHMT2-216ENST00000554975 LCN6P62502 163 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 SNTA1Q13424 505 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 HYAL4Q2M3T9 481 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 TMEM69Q5SWH9 247 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 H1FNTQ75WM6 255 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-216ENST00000554975 BTN2A1Q7KYR7 527 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 OR10H5Q8NGA6 315 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 OR5H6Q8NGV6 325 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 RGP1Q92546 391 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-216ENST00000554975 TMEM106AQ96A25 262 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 PHF21AQ96BD5 680 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 PERPQ96FX8 193 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 SLC6A15Q9H2J7 730 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF703Q9H7S9 590 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-216ENST00000554975 PTGES2Q9H7Z7 377 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 LIN7BQ9HAP6 207 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 PROK2Q9HC23 129 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 EMC7Q9NPA0 242 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 STEAP1Q9UHE8 339 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 POU2F3Q9UKI9 436 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 FOXJ3Q9UPW0 622 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 DHDHQ9UQ10 334 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 KLHDC2Q9Y2U9 406 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 PRR14LQ5THK1 2151 aa9.78□□□□□ -0.84
SHMT2-216ENST00000554975 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-216ENST00000554975 LRRC3CA6NJW4 275 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 PIN1P1O15428 100 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 SIAH2O43255 324 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 WIPF1O43516 503 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 SLC16A7O60669 478 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 SCGNO76038 276 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 TCRBP04435 133 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 DPP4P27487 766 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 ADH6P28332 368 aa9.77□□□□□ -0.85
SHMT2-216ENST00000554975 DCTDP32321 178 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms