RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 BRD7Q9NPI1 651 aa18.31■□□□□ 0.52
SDR39U1-208ENST00000554698 INPP5EQ9NRR6 644 aa18.31■□□□□ 0.52
SDR39U1-208ENST00000554698 CGGBP1Q9UFW8 167 aaPredicted RBP18.31■□□□□ 0.52
SDR39U1-208ENST00000554698 N6AMT1Q9Y5N5 214 aa18.31■□□□□ 0.52
SDR39U1-208ENST00000554698 MYO9AB2RTY4 2548 aa18.31■□□□□ 0.52
SDR39U1-208ENST00000554698 TMEM269A0A1B0GVZ9 245 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 METTL15A6NJ78 407 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 XRCC2O43543 280 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 NDUFS7O75251 213 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 IGHV4-39P01824 125 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 ART1P52961 327 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 PLEKHG7Q6ZR37 379 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 ZCCHC24Q8N2G6 241 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 OR2AE1Q8NHA4 323 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 SNX33Q8WV41 574 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 SGK3Q96BR1 496 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 SORCS2Q96PQ0 1159 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 VRK1Q99986 396 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 JAM3Q9BX67 310 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 OR10A2Q9H208 303 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 OPA3Q9H6K4 179 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 PLCXD1Q9NUJ7 323 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 IRGMA1A4Y4 181 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 TBX1O43435 398 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 TIMM8AO60220 97 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 PNPP00491 289 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 MT-ND5P03915 603 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 NAT2P11245 290 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 LIPAP38571 399 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 CDONQ4KMG0 1287 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 PGAP1Q75T13 922 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 MRPL21Q7Z2W9 205 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 YIPF7Q8N8F6 280 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 GTF3AQ92664 365 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 PGAM5Q96HS1 289 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 ZNF649Q9BS31 505 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 RGCCQ9H4X1 137 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 BARX1Q9HBU1 254 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 CYSLTR2Q9NS75 346 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 RAB26Q9ULW5 256 aa18.3■□□□□ 0.52
SDR39U1-208ENST00000554698 ARFGEF3Q5TH69 2177 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 PLSCR5A0PG75 271 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 C17orf100A8MU93 164 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 IQCF6A8MYZ5 107 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 FAM20BO75063 409 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 SELEP16581 610 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 EFNA4P52798 201 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 MFGE8Q08431 387 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 GALEQ14376 348 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 TESK1Q15569 626 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 LIPNQ5VXI9 398 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 OR2T2Q6IF00 324 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 KCTD20Q7Z5Y7 419 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 KRTAP1-3Q8IUG1 177 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 OR8B12Q8NGG6 310 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 ZNF184Q99676 751 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 RHNO1Q9BSD3 238 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 RAB1BQ9H0U4 201 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 RASSF4Q9H2L5 321 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 ERVK13-1Q9NX77 482 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 NUFIP1Q9UHK0 495 aaKnown RBP18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 R4GMQ9 66 aa18.29■□□□□ 0.52
SDR39U1-208ENST00000554698 MAP1AP78559 2803 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ZSCAN5BA6NJL1 495 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 XPNPEP2O43895 674 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 F12P00748 615 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 PIPP12273 146 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 CFL1P23528 166 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 DCKP27707 260 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ZNF81P51508 661 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 PRSS12P56730 875 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ACTA2P62736 377 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ACTG2P63267 376 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 SNCBQ16143 134 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 TIGD6Q17RP2 521 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 TP53I3Q53FA7 332 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ZMAT1Q5H9K5 638 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 C6orf141Q5SZD1 244 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 EGFL6Q8IUX8 553 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 GGHQ92820 318 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 REEP6Q96HR9 211 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 PBOV1Q9GZY1 135 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 TPK1Q9H3S4 243 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 MOB1AQ9H8S9 216 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 CNOT2Q9NZN8 540 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 PSORS1C1Q9UIG5 152 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ZNF391Q9UJN7 358 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 GNG8Q9UK08 70 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 ITGB1BP2Q9UKP3 347 aa18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 DIMT1Q9UNQ2 313 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-208ENST00000554698 A0A0U1RQV5 110 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 EFCAB10A6NFE3 127 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 LOC110117498-PIK3R3F6TDL0 507 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 ERCC1P07992 297 aaPredicted RBP18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 ADH4P08319 380 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 LIMS3P0CW19 117 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 LIMS4P0CW20 117 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 CSNK2BP67870 215 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 PCGF3Q3KNV8 242 aa18.27■□□□□ 0.51
SDR39U1-208ENST00000554698 PRSS57Q6UWY2 283 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms