RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PEX11AO75192 247 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 ENTPD5O75356 428 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 TOMM40O96008 361 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 PTHP01270 115 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 PRB2P02812 416 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OPN1MWP04001 364 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 DBIP07108 87 aaKnown RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OPN1MW2P0DN77 364 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OPN1MW3P0DN78 364 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 UQCRC2P22695 453 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 GTF2E2P29084 291 aaKnown RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 ACAA2P42765 397 aaKnown RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 AQP5P55064 265 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 MFAP4P55083 255 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 RBBP4Q09028 425 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM155Q4W5P6 130 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 PHYHD1Q5SRE7 291 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 AGBL2Q5U5Z8 902 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 IL23RQ5VWK5 629 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 RUSC1-AS1Q66K80 236 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 SIGIRRQ6IA17 410 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 TNFAIP8L2Q6P589 184 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 LRRC74BQ6ZQY2 392 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 ZCCHC23Q6ZST2 131 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 PIWIL3Q7Z3Z3 882 aaKnown RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 DPPA2Q7Z7J5 298 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 HMGN2P46Q86SG4 172 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 LRRC28Q86X40 367 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF584Q8IVC4 421 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 FOXRED2Q8IWF2 684 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 CNPY4Q8N129 248 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 CLEC4FQ8N1N0 589 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 CADM2Q8N3J6 435 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 KRTCAP2Q8N6L1 136 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 POC5Q8NA72 575 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 SLC30A7Q8NEW0 376 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OR10S1Q8NGN2 331 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OR1J2Q8NGS2 313 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 DYRK2Q92630 601 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 UPRTQ96BW1 309 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 NEURL3Q96EH8 262 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 HARBI1Q96MB7 349 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 PCGF1Q9BSM1 259 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 CHIAQ9BZP6 476 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 C1orf198Q9H425 327 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 NANOGQ9H9S0 305 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 CDH20Q9HBT6 801 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 TNFRSF19Q9NS68 423 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF224Q9NZL3 707 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 B3GAT1Q9P2W7 334 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 OR5V1Q9UGF6 321 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 FIS1Q9Y3D6 152 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 POMT1Q9Y6A1 747 aa4.03□□□□□ -1.76
ATXN3-228ENST00000554592 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 KIR2DS1A0A191URI9 304 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PRSS51A0A1B0GVH4 220 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 MDFIC2A0A1B0GVS7 189 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 EXOC1LA0A1B0GW35 172 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PLSCR5A0PG75 271 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 HMGN4O00479 90 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TM9SF1O15321 606 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CPSF4O95639 269 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SNAP29O95721 258 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV1-46P01743 117 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV2-70P01814 119 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CD55P08174 381 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 WNT2P09544 360 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PATE4P0C8F1 98 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 GKN3PP0CG01 181 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 NR2F1P10589 423 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CCL2P13500 99 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CPA3P15088 417 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 B4GALT1P15291 398 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 NCF2P19878 526 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 GRPRP30550 384 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ARRB2P32121 409 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SLC15A1P46059 708 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 RPS5P46782 204 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CLDN8P56748 225 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ERVS71-1P61550 626 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PAX2Q02962 417 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 EGR4Q05215 589 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 IFFO1Q0D2I5 559 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 FUT5Q11128 374 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PMS2P3Q13401 168 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 FHL1Q13642 323 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PCLAFQ15004 111 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CHI3L2Q15782 390 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 MS4A18Q3C1V0 323 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF718Q3SXZ3 478 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 UGT3A2Q3SY77 523 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CCDC153Q494R4 210 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms