RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 VHLP40337 213 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 CRYBB2P43320 205 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 FMODQ06828 376 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 CD47Q08722 323 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 NKPD1Q17RQ9 610 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 NRN1LQ496H8 165 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 SLC25A30Q5SVS4 291 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 TTC23Q5W5X9 447 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 DHRSXQ8N5I4 330 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 CYB561A3Q8NBI2 242 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 TFAP2CQ92754 450 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 NELFAQ9H3P2 528 aa14.18□□□□□ -0.14
NEK9-204ENST00000554258 HINT3Q9NQE9 182 aaKnown RBP14.18□□□□□ -0.14
NEK9-204ENST00000554258 SLC16A7O60669 478 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 MPIG6BO95866 241 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 GLRXP35754 106 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 AQP4P55087 323 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 CDC42P60953 191 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 RPS23P62266 143 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 SNRPGP62308 76 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 MRPS34P82930 218 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 ARF1P84077 181 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 DEFB112Q30KQ8 113 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 AADACL4Q5VUY2 407 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 TMEM154Q6P9G4 183 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 OR8J1Q8NGP2 316 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 TMEM163Q8TC26 289 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 TSSK2Q96PF2 358 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 ADI1Q9BV57 179 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 HCAR1Q9BXC0 346 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 SRA1Q9HD15 236 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 RPRD1BQ9NQG5 326 aaKnown RBP14.17□□□□□ -0.14
NEK9-204ENST00000554258 GMPPBQ9Y5P6 360 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 INSIG2Q9Y5U4 225 aa14.17□□□□□ -0.14
NEK9-204ENST00000554258 TRAPPC2LH3BP13 241 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 TPD52L2O43399 206 aaKnown RBP14.16□□□□□ -0.14
NEK9-204ENST00000554258 GABRB1P18505 474 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 SLC2A5P22732 501 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 CAPGP40121 348 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 ZNF84P51523 738 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 KCNMB1Q16558 191 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 HFEQ30201 348 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 PCGF3Q3KNV8 242 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 LINC01590Q5TEZ4 76 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 DNM1P34Q6PK57 102 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 USP51Q70EK9 711 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 MDP1Q86V88 176 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 CPOQ8IVL8 374 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 TCEANCQ8N8B7 351 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 ZNF555Q8NEP9 628 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 OR2T4Q8NH00 348 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 RHOXF1Q8NHV9 184 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 ZNRF4Q8WWF5 429 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 NABP1Q96AH0 204 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 PLEKHA8Q96JA3 519 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 FOXB1Q99853 325 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 TMEM38BQ9NVV0 291 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 COA3Q9Y2R0 106 aaPredicted RBP14.16□□□□□ -0.14
NEK9-204ENST00000554258 CACNG2Q9Y698 323 aa14.16□□□□□ -0.14
NEK9-204ENST00000554258 DNAH1Q9P2D7 4330 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 FAM183AA6NL82 134 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 C17orf100A8MU93 164 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 PRR23D1E9PI22 279 aaPredicted RBP14.15□□□□□ -0.14
NEK9-204ENST00000554258 PLATP00750 562 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 FAM157BP0CG42 384 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 PRR23D2P0DMB1 279 aaPredicted RBP14.15□□□□□ -0.14
NEK9-204ENST00000554258 SPI1P17947 270 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 PAICSP22234 425 aaKnown RBP14.15□□□□□ -0.14
NEK9-204ENST00000554258 LAP3P28838 519 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 CENPAP49450 140 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 RPL15P61313 204 aaKnown RBP14.15□□□□□ -0.14
NEK9-204ENST00000554258 IL18R1Q13478 541 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 SNCBQ16143 134 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 FAM27BQ5VT28 67 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 ZNF691Q5VV52 312 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 GLB1L2Q8IW92 636 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 FAM81AQ8TBF8 368 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 NSMAFQ92636 917 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 MED20Q9H944 212 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 SIAEQ9HAT2 523 aa14.15□□□□□ -0.14
NEK9-204ENST00000554258 HYDINQ4G0P3 5121 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 TRAV40A0A0B4J280 105 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 ZNF503-AS2A6NEH8 195 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 M0R129 80 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 PRODHO43272 600 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 SCG5P05408 212 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 CAPZA2P47755 286 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 ISL1P61371 349 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 DBPQ10586 325 aaPredicted RBP14.14□□□□□ -0.15
NEK9-204ENST00000554258 SLC35D3Q5M8T2 416 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 NXNL2Q5VZ03 156 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 PLBD1Q6P4A8 553 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 IZUMO2Q6UXV1 221 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 ZNF813Q6ZN06 617 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 CCDC36Q8IYA8 594 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 TMEM86BQ8N661 226 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 OR9Q1Q8NGQ5 310 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 CYGBQ8WWM9 190 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 IL4I1Q96RQ9 567 aa14.14□□□□□ -0.15
NEK9-204ENST00000554258 PRDM13Q9H4Q3 707 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms