RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCBE1Q6UXH8 406 aaPredicted RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 RASSF6Q6ZTQ3 369 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 GDPD3Q7L5L3 318 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 TCEANCQ8N8B7 351 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 SLC30A7Q8NEW0 376 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 YIPF5Q969M3 257 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 RAB39BQ96DA2 213 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 PRRC1Q96M27 445 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MOGAT1Q96PD6 335 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 OPALINQ96PE5 141 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 OR5M11Q96RB7 305 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 IL4I1Q96RQ9 567 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 KRCC1Q9NPI7 259 aaPredicted RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MRPL39Q9NYK5 338 aaKnown RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 TVP23BQ9NYZ1 205 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 H2AFY2Q9P0M6 372 aaPredicted RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 TAAR3PQ9P1P4 343 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 RHCGQ9UBD6 479 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 A4GNTQ9UNA3 340 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 ANK2Q01484 3957 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 A0A0B4J2E0 115 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 A0A0G2JMP0 313 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 A0A0X1KG70 313 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 A0A1B0GX12 115 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC22A23A1A5C7 686 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 HTR3EA5X5Y0 456 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 LRRN3E7EW58 273 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 PRODHO43272 600 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 WIPF1O43516 503 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 RNF13O43567 381 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 FZD7O75084 574 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 MPZL1O95297 269 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 MT-ND5P03915 603 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SERPINA5P05154 406 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TSPAN19P0C672 248 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR8G3PP0DMU2 310 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 CCL2P13500 99 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 CFL1P23528 166 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 FGF9P31371 208 aaPredicted RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 GRK5P34947 590 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 GSSP48637 474 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC9A3P48764 834 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 KLF3P57682 345 aaPredicted RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 HILS1P60008 231 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 MRPS11P82912 194 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 GLO1Q04760 184 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ACSM1Q08AH1 577 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TSPAN31Q12999 210 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 MELKQ14680 651 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SNAPC1Q16533 368 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TBC1D28Q2M2D7 210 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ARMC4Q5T2S8 1044 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ACSM5Q6NUN0 579 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC27A4Q6P1M0 643 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 MZT2AQ6P582 158 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 DEF8Q6ZN54 512 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 PXKQ7Z7A4 578 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ZER1Q7Z7L7 766 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 PEG10Q86TG7 708 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 COMTD1Q86VU5 262 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR8H2Q8N162 312 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC22A24Q8N4F4 322 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR4M2Q8NGB6 313 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR4K5Q8NGD3 323 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR5J2Q8NH18 312 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 OR6S1Q8NH40 331 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SYNPRQ8TBG9 265 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TEX47Q8TBZ9 253 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TMEM163Q8TC26 289 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC7A13Q8TCU3 470 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 SLC41A3Q96GZ6 507 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TIMD4Q96H15 378 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 KCTD7Q96MP8 289 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ZNF665Q9H7R5 613 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 EXOSC4Q9NPD3 245 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 HINT3Q9NQE9 182 aaKnown RBP7.55□□□□□ -1.2
TDP1-208ENST00000553989 DECR2Q9NUI1 292 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 GLTPQ9NZD2 209 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 ZNF224Q9NZL3 707 aa7.55□□□□□ -1.2
TDP1-208ENST00000553989 TRDV1A0A1B0GX56 115 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 HMX3A6NHT5 357 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 M0R3H8 397 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 PLPP3O14495 311 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 CTDSP2O14595 271 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 CCNKO75909 580 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 OR5F1O95221 314 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 MT-ATP6P00846 226 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 HIST1H2ABP04908 130 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 CCNOP22674 350 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 SDC2P34741 201 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 WNT4P56705 351 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 CLRN1P58418 232 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 ERVS71-1P61550 626 aa7.54□□□□□ -1.2
TDP1-208ENST00000553989 PLP2Q04941 152 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms