RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
VIPAS39-206ENST00000553888 RCE1Q9Y256 329 aa11.19□□□□□ -0.62
VIPAS39-206ENST00000553888 A0A0B4J293 547 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 UBL3O95164 117 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 FCER2P06734 321 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 DDOSTP39656 456 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 SOX8P57073 446 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 C2orf76Q3KRA6 126 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC36A2Q495M3 483 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 GJC3Q8NFK1 279 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 CKLFQ9UBR5 152 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 APC2O95996 2303 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 CALCBP10092 127 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 NR2C1P13056 603 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 PTH2RP49190 550 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 RAB25P57735 213 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 MRPS34P82930 218 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 GPR176Q14439 515 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 RAB11BQ15907 218 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 PDSS1Q5T2R2 415 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 UTS2BQ765I0 119 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM109AQ8N4B1 249 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 OR8H1Q8NGG4 311 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 OR4D6Q8NGJ1 314 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 ENKURQ8TC29 256 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM3DQ96BQ1 224 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 PRRG4Q9BZD6 226 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 CAMK2AQ9UQM7 478 aa11.18□□□□□ -0.62
VIPAS39-206ENST00000553888 A0A1B0GVI7 797 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 ZNF32P17041 273 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 FSTP19883 344 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 DCTDP32321 178 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 ART1P52961 327 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 SNAI3Q3KNW1 292 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 INTS12Q96CB8 462 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 PRRX2Q99811 253 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 FOXB1Q99853 325 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 A0A096LPE4 126 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 TMEM272A0A1B0GTI8 110 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 A0A1W2PPZ6 126 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC17A2O00624 439 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 MRPL33O75394 65 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 KRT33AO76009 404 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 TGM6O95932 706 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM157BP0CG42 384 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 TMEM69Q5SWH9 247 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM166AQ6J272 317 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 NUFIP2Q7Z417 695 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 SKA3Q8IX90 412 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 OR52I2Q8NH67 350 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 PGAM5Q96HS1 289 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 KLK11Q9UBX7 282 aa11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 ANKRD11Q6UB99 2663 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-206ENST00000553888 LINC01387J3KSC0 135 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 SYNGR4O95473 234 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 BTCP35070 178 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 GRB2P62993 217 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 HIST1H3AP68431 136 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 HIST2H3PS2Q5TEC6 136 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 RFPL4BQ6ZWI9 263 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 HIST2H3AQ71DI3 136 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 SIAH3Q8IW03 269 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC38A6Q8IZM9 456 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 OR2AE1Q8NHA4 323 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 CYYR1Q96J86 154 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 CMTM3Q96MX0 182 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 ABCG5Q9H222 651 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 KLK13Q9UKR3 277 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 TRGV5A0A0B4J1U4 118 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 S100A6P06703 90 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 HTR2CP28335 458 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 MMP15P51511 669 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 IGF2-ASQ6U949 168 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 ZNF813Q6ZN06 617 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 CPT1CQ8TCG5 803 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 SLCO5A1Q9H2Y9 848 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 CNTD2Q9H8S5 307 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 RBFOX1Q9NWB1 397 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 RHBDD3Q9Y3P4 386 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 CEP295Q9C0D2 2601 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 ACACAQ13085 2346 aa11.16□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM240BA0A1B0GVZ2 78 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 MEIS3P1A6NDR6 274 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms