RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CEBPDP49716 269 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 CCR8P51685 355 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SUB1P53999 127 aaKnown RBP eCLIP1.65□□□□□ -2.15
VRK1-202ENST00000553683 DAOAP59103 153 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RAB4BP61018 213 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ESRRGP62508 458 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 REG3AQ06141 175 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SCRN3Q0VDG4 424 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 NAB1Q13506 487 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 AQP6Q13520 282 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 IL18Q14116 193 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 DGCR6Q14129 220 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 GPR176Q14439 515 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PDK2Q15119 407 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 YIF1BQ5BJH7 314 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TEX30Q5JUR7 227 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 METTL21CQ5VZV1 264 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ADNP2Q6IQ32 1131 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SLC25A25Q6KCM7 469 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TTC33Q6PID6 262 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 BZW1Q7L1Q6 419 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 ABHD13Q7L211 337 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 STRADAQ7RTN6 431 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 LINC00523Q86TU6 105 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 THOC6Q86W42 341 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 SELENOHQ8IZQ5 122 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 MREGQ8N565 214 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ACOT4Q8N9L9 421 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TTC29Q8NA56 475 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 CCDC112Q8NEF3 446 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 OR5T1Q8NG75 326 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 OR10J5Q8NHC4 309 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 LHFPL5Q8TAF8 219 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ACTL9Q8TC94 416 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MAGEE2Q8TD90 523 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 GLYATL2Q8WU03 294 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CAPSLQ8WWF8 208 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 GEMIN6Q8WXD5 167 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 ING5Q8WYH8 240 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RAB1CQ92928 201 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RMI2Q96E14 147 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 COQ2Q96H96 371 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PRRC1Q96M27 445 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CSPG4P5Q96PW8 444 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TSC22D3Q99576 134 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 NUP58Q9BVL2 599 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 FAIM2Q9BWQ8 316 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CHID1Q9BWS9 393 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ULBP2Q9BZM5 246 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 FAM192AQ9GZU8 254 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MFFQ9GZY8 342 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 FAM107BQ9H098 131 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TOLLIPQ9H0E2 274 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RGCCQ9H4X1 137 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 METTL8Q9H825 291 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 SLC38A10Q9HBR0 1119 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ISYNA1Q9NPH2 558 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ZNF302Q9NR11 478 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 C19orf12Q9NSK7 152 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ETNK2Q9NVF9 386 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MS4A12Q9NXJ0 267 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PDP1Q9P0J1 537 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 SHPKQ9UHJ6 478 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 NAGKQ9UJ70 344 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ZNF222Q9UK12 451 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MEMO1Q9Y316 297 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RHBDD3Q9Y3P4 386 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MRPS18BQ9Y676 258 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 CHD8Q9HCK8 2581 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 MAPKBP1O60336 1514 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 HMGXB3Q12766 1538 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 LRRC7Q96NW7 1537 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CNTLNQ9NXG0 1405 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 COL27A1Q8IZC6 1860 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 NRCAMQ92823 1304 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CDHR2Q9BYE9 1310 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PREX1Q8TCU6 1659 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CAMTA1Q9Y6Y1 1673 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 POLR3AO14802 1390 aaPredicted RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 LRPPRCP42704 1394 aaKnown RBP1.64□□□□□ -2.15
VRK1-202ENST00000553683 CEMIPQ8WUJ3 1361 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CCNB3Q8WWL7 1395 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 IGLV1-50A0A075B6I6 118 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 IGLV3-12A0A075B6K2 115 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 IGHV5-10-1A0A0J9YXX1 117 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 A0A1B0GUH1 482 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 A0A1B0GVI7 797 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GSTTP1A0A1W2PQM5 241 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 LINC00587B1AMM8 73 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 TMEM238C9JI98 176 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 K7EQM0 130 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 CLOCKO15516 846 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 KDELR3O43731 214 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PFDN1O60925 122 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 PLEKHA8P1O95397 391 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 SERPINA5P05154 406 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GNAO1P09471 354 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 STAG3L2P0CL84 134 aa1.64□□□□□ -2.15
VRK1-202ENST00000553683 GIMD1P0DJR0 217 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms