RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LUZP2Q86TE4 346 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CLVS1Q8IUQ0 354 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 LINC00346Q8IVM7 164 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 SKA3Q8IX90 412 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 PHC2Q8IXK0 858 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 C1orf174Q8IYL3 243 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GCNT2Q8N0V5 402 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF433Q8N7K0 673 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF283Q8N7M2 679 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF676Q8N7Q3 588 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 IL17RDQ8NFM7 739 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 STEAP2Q8NFT2 490 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OR5L1Q8NGL2 311 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OR1K1Q8NGR3 316 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OR5AK2Q8NH90 309 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OR1F12Q8NHA8 337 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ST7LQ8TDW4 575 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 BCL2L2Q92843 193 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GCDHQ92947 438 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 NABP1Q96AH0 204 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TMIGD2Q96BF3 282 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 YIPF6Q96EC8 236 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 PELI1Q96FA3 418 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 FOXN4Q96NZ1 517 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ALKBH3Q96Q83 286 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ATF6BQ99941 703 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 FUNDC2Q9BWH2 189 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 MOB1AQ9H8S9 216 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ISG20L2Q9H9L3 353 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 NEK6Q9HC98 313 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 EMC7Q9NPA0 242 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 NGBQ9NPG2 151 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TUBG2Q9NRH3 451 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 SLCO1C1Q9NYB5 712 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 EIF3KQ9UBQ5 218 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 RSL24D1Q9UHA3 163 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 PRSS50Q9UI38 385 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF391Q9UJN7 358 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 STUB1Q9UNE7 303 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OSGIN2Q9Y236 505 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 AMDHD2Q9Y303 409 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 MEMO1Q9Y316 297 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 LSM2Q9Y333 95 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 UGT2A1Q9Y4X1 527 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 R4GMQ9 66 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 INTS1Q8N201 2190 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 MYO7BQ6PIF6 2116 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TRDV1A0A1B0GX56 115 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 A0A1W2PRX2 142 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 A8MXE2 369 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 VSTM5A8MXK1 200 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 LOC110117498-PIK3R3F6TDL0 507 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 PDCD5O14737 125 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SLC22A1O15245 554 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 RER1O15258 196 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ZNHIT1O43257 154 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DOK2O60496 412 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 MTRF1O75570 445 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TNFSF13O75888 250 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ARL6IP5O75915 188 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TOXO94900 526 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 RAF1P04049 648 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SERPINA5P05154 406 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CD2P06729 351 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ITGA5P08648 1049 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CBR1P16152 277 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF32P17041 273 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 PSMB1P20618 241 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 BMP5P22003 454 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 IGHV1-2P23083 117 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CFL1P23528 166 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CHRNB4P30926 498 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 FGF9P31371 208 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 UGT2B10P36537 528 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 LIPAP38571 399 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OPRL1P41146 370 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SERPINB10P48595 397 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GDI2P50395 445 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 PSG4Q00888 419 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GALK2Q01415 458 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 FOXF2Q12947 444 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 MALLQ13021 153 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DYNC1I2Q13409 638 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CDK5R1Q15078 307 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GABRA6Q16445 453 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GSG1Q2KHT4 349 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SLC25A35Q3KQZ1 300 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 C3orf36Q3SXR2 165 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TBRG1Q3YBR2 411 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 YIF1BQ5BJH7 314 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TIMM23BQ5SRD1 257 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 C9orf135Q5VTT2 229 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 LIPKQ5VXJ0 399 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DMKNQ6E0U4 476 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CORO6Q6QEF8 472 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DRAM2Q6UX65 266 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 PLXDC2Q6UX71 529 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms