RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 FMO3P31513 532 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 THBS2P35442 1172 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 HCCSP53701 268 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 TPTEP56180 551 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 CBX1P83916 185 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 GINS1Q14691 196 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 PCK2Q16822 640 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 PLBD1Q6P4A8 553 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 PGAP1Q75T13 922 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 MRPL21Q7Z2W9 205 aaKnown RBP15.27■□□□□ 0.04
SHMT2-206ENST00000553529 DPY19L4Q7Z388 723 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 OR6N2Q8NGY6 317 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 COG8Q96MW5 612 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 C7orf69Q9H7B7 122 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 TMEM165Q9HC07 324 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 BRD7Q9NPI1 651 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 TMEM100Q9NV29 134 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 PCDHB10Q9UN67 800 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 A0A0G2JMP0 313 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 A0A0X1KG70 313 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 A0A1B0GWJ7 208 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TCRBV3S1A0A5B6 114 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 AQP12BA6NM10 295 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 RIIAD1A6NNX1 92 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 CD300LBA8K4G0 201 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 J3QW42 95 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 GNGT2O14610 69 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TUBG1P23258 451 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 NAA10P41227 235 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-206ENST00000553529 RAD23AP54725 363 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 SLC3A1Q07837 685 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 CD300LDQ6UXZ3 194 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF826PQ6ZT77 177 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 PEG10Q86TG7 708 aaKnown RBP15.26■□□□□ 0.03
SHMT2-206ENST00000553529 AQP12AQ8IXF9 295 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 BCL6BQ8N143 479 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-206ENST00000553529 RFLNBQ8N5W9 214 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 BOLLQ8N9W6 283 aaKnown RBP15.26■□□□□ 0.03
SHMT2-206ENST00000553529 OR4M2Q8NGB6 313 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 OR56B2PQ8NGI1 322 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TAF15Q92804 592 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TMEM246Q9BRR3 403 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 ABHD6Q9BV23 337 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TTTY10Q9BZA0 68 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 ESM1Q9NQ30 184 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TUBG2Q9NRH3 451 aa15.26■□□□□ 0.03
SHMT2-206ENST00000553529 TBX1O43435 398 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 MITFO75030 526 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 FCN3O75636 299 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 FSHBP01225 129 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF3P17036 446 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 CD80P33681 288 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 GRK5P34947 590 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 CX3CR1P49238 355 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 POU4F2Q12837 409 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 ECH1Q13011 328 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 GFOD2Q3B7J2 385 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 KLHL12Q53G59 568 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 KLF17Q5JT82 389 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 SFRP4Q6FHJ7 346 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 C1QL2Q7Z5L3 287 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 BCDIN3DQ7Z5W3 292 aaKnown RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 WDR86Q86TI4 376 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 TIGD4Q8IY51 512 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 SPRYD4Q8WW59 207 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 KCNJ15Q99712 375 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 ADAT1Q9BUB4 502 aaKnown RBP15.25■□□□□ 0.03
SHMT2-206ENST00000553529 BAIAP2Q9UQB8 552 aa15.25■□□□□ 0.03
SHMT2-206ENST00000553529 PRR32B1ATL7 298 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 SURF4O15260 269 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 GSC2O15499 205 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 E2F6O75461 281 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-206ENST00000553529 ANPEPP15144 967 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 EGR1P18146 543 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 GSTT1P30711 240 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 MDH2P40926 338 aaKnown RBP15.24■□□□□ 0.03
SHMT2-206ENST00000553529 SRP9P49458 86 aaKnown RBP15.24■□□□□ 0.03
SHMT2-206ENST00000553529 TAF13Q15543 124 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 TMEM155Q4W5P6 130 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 FAM57BQ71RH2 274 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 PRSS45Q7RTY3 260 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 FGFRL1Q8N441 504 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 KLHL36Q8N4N3 616 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 SPTSSAQ969W0 71 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 DUX5Q96PT3 197 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 INTS14Q96SY0 518 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 CTSZQ9UBR2 303 aa15.24■□□□□ 0.03
SHMT2-206ENST00000553529 GGT3PA6NGU5 568 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF878C9JN71 531 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 PSMD9O00233 223 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 IFNGP01579 166 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 ANXA2P07355 339 aaKnown RBP15.23■□□□□ 0.03
SHMT2-206ENST00000553529 WNT2P09544 360 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 RPS2P15880 293 aaKnown RBP15.23■□□□□ 0.03
SHMT2-206ENST00000553529 PCMT1P22061 227 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 EPHA2P29317 976 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF121P58317 390 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-206ENST00000553529 CDK5Q00535 292 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 MALLQ13021 153 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms