RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 P2RY8Q86VZ1 359 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 NEXN-AS1Q8NBZ9 246 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 OR1K1Q8NGR3 316 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 OR13C2Q8NGS9 318 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 OR6S1Q8NH40 331 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 GNPDA2Q8TDQ7 276 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ACOT11Q8WXI4 607 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 NEUROG1Q92886 237 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM45BQ96B21 275 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 FOXN4Q96NZ1 517 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 RBP7Q96R05 134 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 OR2M2Q96R28 347 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 WACQ9BTA9 647 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ULBP2Q9BZM5 246 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 SLC19A3Q9BZV2 496 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 TRIM15Q9C019 465 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 POLR2J2Q9GZM3 115 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 NDEL1Q9GZM8 345 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 POLR2J3Q9H1A7 115 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 PLK3Q9H4B4 646 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 SLC17A5Q9NRA2 495 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 NKIRAS2Q9NYR9 191 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ACTR3BQ9P1U1 418 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF346Q9UL40 294 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 RNF115Q9Y4L5 304 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 IER3IP1Q9Y5U9 82 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 U3KQV3 271 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 SPENQ96T58 3664 aaKnown RBP4.05□□□□□ -1.76
ATXN3-220ENST00000553491 DCHS2Q6V1P9 2916 aa4.05□□□□□ -1.76
ATXN3-220ENST00000553491 ASH1LQ9NR48 2969 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TRBV4-1A0A0J9YWV2 114 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 DEFB108AA8MXU0 73 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 H7C1C5 153 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TNFRSF13BO14836 293 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 WNT9BO14905 357 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 HSPA12AO43301 675 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SMPD2O60906 423 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 E2F6O75461 281 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TRMUO75648 421 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CIB2O75838 187 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TPPPO94811 219 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CCNB2O95067 398 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 FARS2O95363 451 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CST1P01037 141 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 IGHG1P01857 330 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 HLA-HP01893 362 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CRYAAP02489 173 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 RAF1P04049 648 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ASAH2BP0C7U1 165 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SELLP14151 372 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 B4GALT1P15291 398 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM11P17152 192 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 IFNGR2P38484 337 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 RFX2P48378 723 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 IDH3GP51553 393 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 P2RY4P51582 365 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 LCN6P62502 163 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ZP4Q12836 540 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TRAP1Q12931 704 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 FLOT2Q14254 428 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 EFNB3Q15768 340 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ACKR1Q16570 336 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM53Q6P2H8 277 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SMARCD3Q6STE5 483 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 OFCC1Q8IZS5 231 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 FBXL14Q8N1E6 418 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ARHGAP24Q8N264 748 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 WDR31Q8NA23 367 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ICA1LQ8NDH6 482 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 KBTBD8Q8NFY9 601 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 OR4K5Q8NGD3 323 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 OR6X1Q8NH79 312 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SLC7A13Q8TCU3 470 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 MCHR2Q969V1 340 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 FBXO17Q96EF6 278 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SAT2Q96F10 170 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SLC25A44Q96H78 314 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 C7orf34Q96L11 122 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SAMD8Q96LT4 415 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 MUS81Q96NY9 551 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ERMAPQ96PL5 475 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CCL19Q99731 98 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SH3GL3Q99963 347 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 KATNB1Q9BVA0 655 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 LINC00470Q9BZP3 86 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 OR51B6Q9H340 312 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 TXNIPQ9H3M7 391 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 DENND2DQ9H6A0 471 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms