RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SLC30A8Q8IWU4 369 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 C1orf87Q8N0U7 546 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 ATG16L2Q8NAA4 619 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 C19orf18Q8NEA5 215 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 OR13G1Q8NGZ3 307 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 FNDC8Q8TC99 324 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 MRAPQ8TCY5 172 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 TMEM239Q8WW34 195 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 PTP4A1Q93096 173 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 LHX4Q969G2 390 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 FOXRED1Q96CU9 486 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-219ENST00000553488 MAGEB18Q96M61 343 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 COG8Q96MW5 612 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 WACQ9BTA9 647 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 TRIM15Q9C019 465 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 SEMA6AQ9H2E6 1030 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 PTTG3PQ9NZH4 202 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 ATPIF1Q9UII2 106 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 VPREB3Q9UKI3 123 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 TMCC3Q9ULS5 477 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 ZNF816-ZNF321PA0A0X1KG74 233 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 LRRC30A6NM36 301 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 EVPLLA8MZ36 301 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 H7C1C5 153 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 FAM20BO75063 409 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 OR5F1O95221 314 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 HLA-DPB1P04440 258 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 LIPFP07098 398 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 TNFRSF1BP20333 461 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 CD200P41217 278 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 RGS6P49758 472 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 LOXL3P58215 753 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 MTPNP58546 118 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 STX1BP61266 288 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 LCN6P62502 163 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 AQP6Q13520 282 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 ICAM4Q14773 271 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 HERPUD1Q15011 391 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 CYP51A1Q16850 503 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 CCDC92Q53HC0 331 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-219ENST00000553488 METTL11BQ5VVY1 283 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 OTPQ5XKR4 325 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 C1orf94Q6P1W5 598 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 EPGNQ6UW88 154 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 PATL1Q86TB9 770 aaKnown RBP5.97□□□□□ -1.45
ATXN3-219ENST00000553488 IGFN1Q86VF2 1251 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 ANKRD42Q8N9B4 389 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 PCYOX1LQ8NBM8 494 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 LRTOMTQ8WZ04 291 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 CFHR4Q92496 578 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 RASD2Q96D21 266 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 TECTBQ96PL2 329 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 RBP7Q96R05 134 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 PAIP2Q9BPZ3 127 aaKnown RBP5.97□□□□□ -1.45
ATXN3-219ENST00000553488 KCNK9Q9NPC2 374 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 AURKAIP1Q9NWT8 199 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-219ENST00000553488 CCDC167Q9P0B6 97 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 KIF17Q9P2E2 1029 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 USH1CQ9Y6N9 552 aa5.97□□□□□ -1.45
ATXN3-219ENST00000553488 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TEX13CA0A0J9YWL9 993 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TMEM120BA0PK00 339 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 A6NIZ1 184 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 LGALS8O00214 317 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 FBP2O00757 339 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 PTBP3O95758 552 aaKnown RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 CTLA4P16410 223 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF20P17024 532 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 GZMMP51124 257 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 EFNB2P52799 333 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TAS2R41P59536 307 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 CTXN1P60606 82 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 RAP1BP61224 184 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 RAP1AP62834 184 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 PIN1Q13526 163 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 MPPED2Q15777 294 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 KRTAP27-1Q3LI81 207 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 MESTQ5EB52 335 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 VAX1Q5SQQ9 334 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 INTS11Q5TA45 600 aaKnown RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 PRAMEF6Q5VXH4 476 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TMEM200BQ69YZ2 307 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 C11orf87Q6NUJ2 197 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 COLCA1Q6ZS62 124 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 CCDC80Q76M96 950 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 DHDDSQ86SQ9 333 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 PDZD9Q8IXQ8 264 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 GALNT4Q8N4A0 578 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 PNLDC1Q8NA58 520 aaKnown RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 SCCPDHQ8NBX0 429 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 FAM156AQ8NDB6 213 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 BHLHE23Q8NDY6 225 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 OR1F12Q8NHA8 337 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 ERGIC1Q969X5 290 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 C8orf49Q96NF6 230 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF582Q96NG8 517 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 ECSITQ9BQ95 431 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 EBF4Q9BQW3 602 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 POLR2J2Q9GZM3 115 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms