RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ADGRA3Q8IWK6 1321 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 IGHV1-69DA0A0B4J2H0 117 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 GABRR3A8MPY1 467 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 XRCC2O43543 280 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 CDC40O60508 579 aaKnown RBP eCLIP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 FOXH1O75593 365 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 WISP3O95389 354 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 CD70P32970 193 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 PEX19P40855 299 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 PPICP45877 212 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 GPR1P46091 355 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 ATP6V0D1P61421 351 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 RPL23P62829 140 aaKnown RBP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 CACNG7P62955 275 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 CDK5Q00535 292 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 HADHQ16836 314 aaKnown RBP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 ABCA11PQ4W5N1 156 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 FBXW9Q5XUX1 488 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 H3F3CQ6NXT2 135 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 LINC00336Q6ZUF6 198 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 LGI3Q8N145 548 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 ZNF321PQ8N8H1 164 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 FAM184AQ8NB25 1140 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 OR2L8Q8NGY9 312 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 ITFG1Q8TB96 612 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 SYNPRQ8TBG9 265 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 ESR2Q92731 530 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 RGCCQ9H4X1 137 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 TMEM27Q9HBJ8 222 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 SLC38A10Q9HBR0 1119 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-210ENST00000553455 SIRT7Q9NRC8 400 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 HYOU1Q9Y4L1 999 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 DOCK8Q8NF50 2099 aa3.04□□□□□ -1.92
SYNE2-210ENST00000553455 LRCOL1A6NCL2 159 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 KRBOX1C9JBD0 128 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 H0YJW9 148 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 TRDMT1O14717 391 aaKnown RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 SLC16A7O60669 478 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 FARS2O95363 451 aaKnown RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 OR56A5P0C7T3 313 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 C5orf47Q569G3 176 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 MRPL21Q7Z2W9 205 aaKnown RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 SNX20Q7Z614 316 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 UBALD2Q8IYN6 164 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 MYOCDQ8IZQ8 938 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 TRAM1L1Q8N609 369 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 AGMATQ9BSE5 352 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 FGF23Q9GZV9 251 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 IL22Q9GZX6 179 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 NAA50Q9GZZ1 169 aaKnown RBP3.03□□□□□ -1.92
SYNE2-210ENST00000553455 CLSTN2Q9H4D0 955 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 ZNF442Q9H7R0 627 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 ZC4H2Q9NQZ6 224 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 RGS18Q9NS28 235 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 MCUBQ9NWR8 336 aa3.03□□□□□ -1.92
SYNE2-210ENST00000553455 C5orf63A6NC05 138 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 SLC22A20A6NK97 555 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 SERPINE3A8MV23 424 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 MPDU1O75352 247 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 SLC22A5O76082 557 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 VAMP5O95183 116 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 GLAP06280 429 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 LINC00869P0C866 280 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 TCP1P17987 556 aaKnown RBP3.02□□□□□ -1.93
SYNE2-210ENST00000553455 RAB5AP20339 215 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 MYCNOSP40205 109 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 BCAP31P51572 246 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 MOBPQ13875 183 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 TSC22D1Q15714 1073 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 ZNF829Q3KNS6 432 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-210ENST00000553455 MPV17L2Q567V2 206 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 UNC93AQ86WB7 457 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 OR52P1PQ8NH57 321 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 ISOC2Q96AB3 205 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 KIAA1143Q96AT1 154 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-210ENST00000553455 GPR21Q99679 349 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 RRAGDQ9NQL2 400 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-210ENST00000553455 CHRAC1Q9NRG0 131 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 RFNGQ9Y644 331 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 PTPRTO14522 1441 aa3.02□□□□□ -1.93
SYNE2-210ENST00000553455 IGLV4-60A0A075B6I1 120 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 IGKV2-28A0A075B6P5 120 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 TRAV19A0A0A6YYK7 116 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 CCNKO75909 580 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 CATP04040 527 aaKnown RBP3.01□□□□□ -1.93
SYNE2-210ENST00000553455 MUC1P15941 1255 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-210ENST00000553455 MSR1P21757 451 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 LOXP28300 417 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-210ENST00000553455 GABRR2P28476 465 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 CFHR2P36980 270 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 TAS2R46P59540 309 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 CRADDP78560 199 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 LCN2P80188 198 aa3.01□□□□□ -1.93
SYNE2-210ENST00000553455 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms