RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 NRGNQ92686 78 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 MRPL24Q96A35 216 aaKnown RBP18.19■□□□□ 0.5
VPS29-206ENST00000549578 CDCA4Q9BXL8 241 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 YTHDF1Q9BYJ9 559 aaKnown RBP18.19■□□□□ 0.5
VPS29-206ENST00000549578 SP140LQ9H930 580 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 G6PC2Q9NQR9 355 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 DUSP13Q9UII6 198 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 SLC22A13Q9Y226 551 aa18.19■□□□□ 0.5
VPS29-206ENST00000549578 E9PI62 339 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MYL12BO14950 172 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MT-ND5P03915 603 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 SOD3P08294 240 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 ZNF250P15622 560 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 GABARAPL2P60520 117 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 ZNF92Q03936 586 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MALLQ13021 153 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 GK2Q14410 553 aaPredicted RBP18.18■□□□□ 0.5
VPS29-206ENST00000549578 TMEM255AQ5JRV8 349 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 FBXL14Q8N1E6 418 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MUC15Q8N387 334 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 OR52N1Q8NH53 320 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 SYNPRQ8TBG9 265 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 GATAD2BQ8WXI9 593 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 OR10A2Q9H208 303 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 LIME1Q9H400 295 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 PLK3Q9H4B4 646 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MYEF2Q9P2K5 600 aaKnown RBP18.18■□□□□ 0.5
VPS29-206ENST00000549578 NUFIP1Q9UHK0 495 aaKnown RBP18.18■□□□□ 0.5
VPS29-206ENST00000549578 OR52A1Q9UKL2 312 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 ERGIC3Q9Y282 383 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 SNX5Q9Y5X3 404 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 TMEM129A0AVI4 362 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 ACOD1A6NK06 481 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 VSTM5A8MXK1 200 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 DANCRP0C864 163 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 GCH1P30793 250 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 IRF3Q14653 427 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 TIGD6Q17RP2 521 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 WDR38Q5JTN6 314 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 BCL2L15Q5TBC7 163 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 RNLSQ5VYX0 342 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MBNL2Q5VZF2 373 aaKnown RBP18.18■□□□□ 0.5
VPS29-206ENST00000549578 PRSS48Q7RTY5 328 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 CATSPERDQ86XM0 798 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 PRSS35Q8N3Z0 413 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 NANOGP1Q8N7R0 232 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 SGK3Q96BR1 496 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 CMBLQ96DG6 245 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 MOB1AQ9H8S9 216 aa18.18■□□□□ 0.5
VPS29-206ENST00000549578 APCP25054 2843 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 XRCC2O43543 280 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 TTRP02766 147 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 TUBG1P23258 451 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 GBX2P52951 348 aaPredicted RBP18.17■□□□□ 0.5
VPS29-206ENST00000549578 CDH15P55291 814 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 KLF3P57682 345 aaPredicted RBP18.17■□□□□ 0.5
VPS29-206ENST00000549578 NANOS3P60323 173 aaKnown RBP18.17■□□□□ 0.5
VPS29-206ENST00000549578 PSG7Q13046 419 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 DOC2BQ14184 412 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 ODF4Q2M2E3 257 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 XAF1Q6GPH4 301 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 FBXW12Q6X9E4 464 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 MRPL21Q7Z2W9 205 aaKnown RBP18.17■□□□□ 0.5
VPS29-206ENST00000549578 KLBQ86Z14 1044 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 OR2G2Q8NGZ5 317 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 REEP6Q96HR9 211 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 TUBG2Q9NRH3 451 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 FAIMQ9NVQ4 179 aa18.17■□□□□ 0.5
VPS29-206ENST00000549578 FLNBO75369 2602 aaKnown RBP18.16■□□□□ 0.5
VPS29-206ENST00000549578 LALBAP00709 142 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 KIR3DL2P43630 455 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 GTF2A1P52655 376 aaPredicted RBP18.16■□□□□ 0.5
VPS29-206ENST00000549578 CHN2P52757 468 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 MST1LQ2TV78 715 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 C20orf204Q6ZNR8 217 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 PGAP1Q75T13 922 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 EGFL6Q8IUX8 553 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 ELMOD2Q8IZ81 293 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 LYZL4Q96KX0 146 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 SOX7Q9BT81 388 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 MND1Q9BWT6 205 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 BABAM2Q9NXR7 383 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 FRRS1LQ9P0K9 344 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 LAMP3Q9UQV4 416 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 SPG11Q96JI7 2443 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 CACNA1DQ01668 2161 aa18.16■□□□□ 0.5
VPS29-206ENST00000549578 IGLV3-9A0A075B6K5 115 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 A0A1W2PPW3 197 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 H3BSA7 217 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 CD8AP01732 235 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 RAC2P15153 192 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 MAP2K4P45985 399 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 WNT4P56705 351 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 EFNB3Q15768 340 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 ALKBH6Q3KRA9 238 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 AGAP6Q5VW22 663 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 OR2T2Q6IF00 324 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 FDX2Q6P4F2 183 aa18.15■□□□□ 0.5
VPS29-206ENST00000549578 OR51E1Q8TCB6 317 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms