RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ATP5IP56385 69 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SCRN3Q0VDG4 424 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SF3A2Q15428 464 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PRSS35Q8N3Z0 413 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 CHST4Q8NCG5 386 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR4N2Q8NGD1 307 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR5M1Q8NGP8 315 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LILRB4Q8NHJ6 448 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TNFRSF14Q92956 283 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 CCDC124Q96CT7 223 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PELI1Q96FA3 418 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 IMPAD1Q9NX62 359 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 COPZ2Q9P299 210 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SLC45A2Q9UMX9 530 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 FAM32AQ9Y421 112 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ARID1BQ8NFD5 2236 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 DYSFO75923 2080 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF814B7Z6K7 855 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 SHISA8B8ZZ34 492 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 SLC17A2O00624 439 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 OR2J2O76002 312 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 CLPXO76031 633 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 PTTG1O95997 202 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 APOA1P02647 267 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 P04436 131 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 CSF3P09919 207 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 WT1P19544 449 aaPredicted RBP4.21□□□□□ -1.73
SCAF11-212ENST00000549162 MEOX1P50221 254 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 NFATC3Q12968 1075 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM249Q2WGJ8 235 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF750Q32MQ0 723 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 PCGF3Q3KNV8 242 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 XKRXQ6PP77 449 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 MOB1BQ7L9L4 216 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 WDFY1Q8IWB7 410 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 RDH10Q8IZV5 341 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 KDM8Q8N371 416 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 SIRT6Q8N6T7 355 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 SMYD1Q8NB12 490 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 GJC3Q8NFK1 279 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 OR5M3Q8NGP4 307 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 ZNRF4Q8WWF5 429 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 RPL3LQ92901 407 aaKnown RBP4.21□□□□□ -1.73
SCAF11-212ENST00000549162 MAL2Q969L2 176 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 C5orf34Q96MH7 638 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 WNT5BQ9H1J7 359 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 ABCB10Q9NRK6 738 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 CA10Q9NS85 328 aa4.21□□□□□ -1.73
SCAF11-212ENST00000549162 A6NNC1 897 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 RIIAD1A6NNX1 92 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 A8MX80 341 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 H3BS24 57 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ENTPD6O75354 484 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 WDPCPO95876 746 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 HLA-DPB1P04440 258 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ERCC1P07992 297 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 PTAFRP25105 342 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 HLA-DMAP28067 261 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 HTD2P86397 168 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ROR2Q01974 943 aaKnown RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 GINS1Q14691 196 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 KIR3DS1Q14943 382 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ZIK1Q3SY52 487 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM155Q4W5P6 130 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 VWA2Q5GFL6 755 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 C9orf152Q5JTZ5 239 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 UBE2NLQ5JXB2 153 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 Q6ZNX1 250 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 LRRC28Q86X40 367 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 NRMQ8IXM6 262 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 OR6V1Q8N148 313 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 STEAP2Q8NFT2 490 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ATOH1Q92858 354 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 STARD4Q96DR4 205 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 TAAR6Q96RI8 345 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 IL4I1Q96RQ9 567 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 TSSK6Q9BXA6 273 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 OR2H1Q9GZK4 316 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 DCSTAMPQ9H295 470 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 KCNN3Q9UGI6 736 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 PEX16Q9Y5Y5 336 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 HEATR5AQ86XA9 2040 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 TRBV6-7A0A0A0MS04 114 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 PRKRAO75569 313 aaKnown RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 CA8P35219 290 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 GLP1RP43220 463 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 HFEQ30201 348 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 Q499Y3 187 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 KCTD18Q6PI47 426 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-212ENST00000549162 OAFQ86UD1 273 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 CACUL1Q86Y37 369 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 POC1AQ8NBT0 407 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 OR5A2Q8NGI9 324 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 PFN4Q8NHR9 129 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 SLC7A6Q92536 515 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 KAT2AQ92830 837 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 SIGLEC12Q96PQ1 595 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 NUAK2Q9H093 628 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms