RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 CNIH3Q8TBE1 160 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 SPRYD4Q8WW59 207 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-205ENST00000549034 GTF3AQ92664 365 aaKnown RBP8.2□□□□□ -1.1
RAB5B-205ENST00000549034 Q96MF0 132 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 RHNO1Q9BSD3 238 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 NIPAL2Q9H841 368 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 MSL2Q9HCI7 577 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 CYSLTR2Q9NS75 346 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 DECR2Q9NUI1 292 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 EXOGQ9Y2C4 368 aaKnown RBP8.2□□□□□ -1.1
RAB5B-205ENST00000549034 LRP12Q9Y561 859 aa8.2□□□□□ -1.1
RAB5B-205ENST00000549034 HRNRQ86YZ3 2850 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-205ENST00000549034 PDZD2O15018 2839 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 METTL15A6NJ78 407 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 PRR32B1ATL7 298 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 H0YJX3 145 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 XRCC2O43543 280 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 RRP9O43818 475 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 WBP4O75554 376 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 RPP14O95059 124 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 KRT8P05787 483 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 DBTP11182 482 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 DAOP14920 347 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 KITLGP21583 273 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ANOS1P23352 680 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 COL8A2P25067 703 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 MAGEB1P43366 347 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 AQP4P55087 323 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ISL1P61371 349 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 CCL8P80075 99 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ROM1Q03395 351 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ZNF85Q03923 595 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 CDK5R2Q13319 367 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 SMN1Q16637 294 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 TIGD6Q17RP2 521 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 GFOD2Q3B7J2 385 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 C6orf52Q5T4I8 152 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 SSX6Q7RTT6 188 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 LHFPL3Q86UP9 236 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 C8orf59Q8N0T1 100 aaPredicted RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 RFLNBQ8N5W9 214 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 OR8G5Q8NG78 346 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 OR2Z1Q8NG97 314 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 OR52H1Q8NGJ2 320 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 UBASH3BQ8TF42 649 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 APH1BQ8WW43 257 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 TFAP2CQ92754 450 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 LGALS12Q96DT0 336 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 REEP6Q96HR9 211 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 TMEM100Q9NV29 134 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ZNF319Q9P2F9 582 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 MRM2Q9UI43 246 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ZDHHC8Q9ULC8 765 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 GTF2A1LQ9UNN4 478 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 HSPE1-MOB4S4R3N1 261 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 ANKRD17O75179 2603 aaKnown RBP8.19□□□□□ -1.1
RAB5B-205ENST00000549034 NOTCH2Q04721 2471 aa8.19□□□□□ -1.1
RAB5B-205ENST00000549034 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ACOD1A6NK06 481 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 LYNX1G3V0Z9 82 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 FADS2O95864 444 aaKnown RBP8.18□□□□□ -1.1
RAB5B-205ENST00000549034 IGHV1-46P01743 117 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 HPXP02790 462 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 GNAO1P09471 354 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 TACSTD2P09758 323 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 LYNX1P0DP58 116 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 DCTDP32321 178 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 PDLIM4P50479 330 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 DSCR9P59020 149 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ACTC1P68032 377 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ACTA1P68133 377 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ZNF91Q05481 1191 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 RAB40BQ12829 278 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 TNK1Q13470 666 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 TP53I3Q53FA7 332 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ZMAT1Q5H9K5 638 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 CLEC2AQ6UVW9 174 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 Q6ZR03 302 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 PLEKHG7Q6ZR37 379 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 PRSS45Q7RTY3 260 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 TGIF2LYQ8IUE0 185 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ACBD7Q8N6N7 88 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 ZNF525Q8N782 197 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 BHLHE23Q8NDY6 225 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 OR13G1Q8NGZ3 307 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 FAM168AQ92567 244 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 SIGLEC11Q96RL6 698 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 PBOV1Q9GZY1 135 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-205ENST00000549034 GNG8Q9UK08 70 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 MYRFQ9Y2G1 1151 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 POLQO75417 2590 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
RAB5B-205ENST00000549034 TRIM64A6NGJ6 449 aa8.17□□□□□ -1.1
RAB5B-205ENST00000549034 TRIM64BA6NI03 449 aa8.17□□□□□ -1.1
RAB5B-205ENST00000549034 ZSCAN5BA6NJL1 495 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms