RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PPT1P50897 306 aa12.67□□□□□ -0.38
CACNB3-209ENST00000548860 CLPPQ16740 277 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-209ENST00000548860 CDCP2Q5VXM1 449 aa12.67□□□□□ -0.38
CACNB3-209ENST00000548860 TMEM65Q6PI78 240 aa12.67□□□□□ -0.38
CACNB3-209ENST00000548860 OR1M1Q8NGA1 313 aa12.67□□□□□ -0.38
CACNB3-209ENST00000548860 SMOC1Q9H4F8 434 aa12.67□□□□□ -0.38
CACNB3-209ENST00000548860 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
CACNB3-209ENST00000548860 GALP22466 123 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 MTCP1P56278 107 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 GABREP78334 506 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 RSU1Q15404 277 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 SLC51BQ86UW2 128 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 UBALD1Q8TB05 177 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 PIGCQ92535 297 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 HOXB13Q92826 284 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 ADAT3Q96EY9 351 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 TRANK1O15050 2925 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 DIRAS3O95661 229 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 MST1P26927 711 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 EGR3Q06889 387 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 NXT1Q9UKK6 140 aaKnown RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 APC2O95996 2303 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 LRRK1Q38SD2 2015 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 XRCC2O43543 280 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 ZNF254O75437 659 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 GLRA1P23415 457 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 CX3CR1P49238 355 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 ATPAF1Q5TC12 328 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 TMEM71Q6P5X7 295 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 PRSS42Q7Z5A4 293 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 GRAMD2AQ8IUY3 354 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 SLAMF9Q96A28 289 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 ARHGAP5-AS1Q96IT6 56 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 D6RAR5 112 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 WRBO00258 174 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-209ENST00000548860 MED6O75586 246 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 IFNA21P01568 189 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 DUSP1P28562 367 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 CAV2P51636 162 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 SLC22A24Q8N4F4 322 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 TMEM104Q8NE00 496 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 OR1N1Q8NGS0 311 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 RNF128Q8TEB7 428 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 PHYHIPQ92561 330 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 CYYR1Q96J86 154 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 R4GMQ9 66 aa12.66□□□□□ -0.38
CACNB3-209ENST00000548860 IGHV1OR21-1A0A087WYE8 117 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 FRG2CA6NGY1 282 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 PLPP3O14495 311 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 RBMXL2O75526 392 aaKnown RBP12.65□□□□□ -0.38
CACNB3-209ENST00000548860 PMS2P2O95744 297 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 PLXDC2Q6UX71 529 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 ULBP2Q9BZM5 246 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 SLC19A3Q9BZV2 496 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 GPR31O00270 319 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 OR7C1O76099 320 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-209ENST00000548860 ASAH2BP0C7U1 165 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 KLK2P20151 261 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 TLE1Q04724 770 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 RIN1Q13671 783 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
CACNB3-209ENST00000548860 A6NIZ1 184 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 RAP1BP61224 184 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 RAP1AP62834 184 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 PDSS1Q5T2R2 415 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 RNF144BQ7Z419 303 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 PPP1R3BQ86XI6 285 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 OR1S2Q8NGQ3 325 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 DYRK2Q92630 601 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 S1PR5Q9H228 398 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 CHST11Q9NPF2 352 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.39
CACNB3-209ENST00000548860 FER1L5A0AVI2 2057 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 OR5H15A6NDH6 313 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 ZFAND5O76080 213 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 ATG12O94817 140 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 UBBP0CG47 229 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 UBCP0CG48 685 aaKnown RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 EPHA1P21709 976 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 SLC25A1P53007 311 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 RRADP55042 308 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 FGL1Q08830 312 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 PTTG3PQ9NZH4 202 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 C9J4A7 227 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 LMO7DNF2Z398 122 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 BET1O15155 118 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 NMBP08949 121 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms