RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 OR1M1Q8NGA1 313 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 OR5D14Q8NGL3 314 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 ZC3HAV1LQ96H79 300 aaKnown RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 PKDREJQ9NTG1 2253 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CCDC187A0A096LP49 1063 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ANGPTL7O43827 346 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CBR3O75828 277 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 VAMP1P23763 118 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 HOXA6P31267 233 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 TSPAN5P62079 268 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF774Q6NX45 483 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ANKRD16Q6P6B7 361 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CREB3L2Q70SY1 520 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 RADILQ96JH8 1075 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCAF11-209ENST00000547018 DEFB127Q9H1M4 99 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 SLC6A15Q9H2J7 730 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 FAM86C1Q9NVL1 165 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 HDGFL3Q9Y3E1 203 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CCSO14618 274 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 CD96P40200 585 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 ZP4Q12836 540 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 IDO2Q6ZQW0 420 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 OR8H3Q8N146 312 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 FTMTQ8N4E7 242 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 PIGQQ9BRB3 760 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 FAM206AQ9NX38 181 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 PRELID1Q9Y255 219 aa11.23□□□□□ -0.61
SCAF11-209ENST00000547018 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
SCAF11-209ENST00000547018 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 STMND1H3BQB6 276 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 DHHO43323 396 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 HTR3BO95264 441 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ACHEP22303 614 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 AVPR2P30518 371 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 DTX1Q86Y01 620 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 NAXDQ8IW45 347 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 PAQR8Q8TEZ7 354 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 SEC22AQ96IW7 307 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 SNX18Q96RF0 628 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ST6GALNAC5Q9BVH7 336 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ZCCHC4Q9H5U6 513 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF230Q9UIE0 474 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 SHANK1Q9Y566 2161 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ARGFXA6NJG6 315 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 MAGEA5P43359 124 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 P2RY4P51582 365 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 GMFBP60983 142 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 CXADRP78310 365 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 TRAPPC6BQ86SZ2 158 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 GPR137CQ8N3F9 429 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 S100A13Q99584 98 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 C12orf49Q9H741 205 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 IGF2RP11717 2491 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 GOSR2O14653 212 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ECDO95905 644 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 MT-CO3P00414 261 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 PMP2P02689 132 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 AKR1C4P17516 323 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 MSR1P21757 451 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 MAP2K6P52564 334 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 TRA2AQ13595 282 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 KCTD9Q7L273 389 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF584Q8IVC4 421 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 C20orf196Q8IYI0 205 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 OR6M1Q8NGM8 313 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 OR6X1Q8NH79 312 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 SLC25A43Q8WUT9 341 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 SCMH1Q96GD3 660 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 IFT46Q9NQC8 304 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 PRR13Q9NZ81 148 aa11.22□□□□□ -0.61
SCAF11-209ENST00000547018 LOC102723996A0A087X1L8 192 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 FAM221AA4D161 298 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF736B4DX44 427 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-209ENST00000547018 CDX4O14627 284 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-209ENST00000547018 FCGR2AP12318 317 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 GABRR1P24046 479 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 PTGS2P35354 604 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 CSNK2A1P68400 391 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-209ENST00000547018 C2orf68Q2NKX9 166 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms