RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DUX4L3P0CJ86 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L4P0CJ87 422 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L5P0CJ88 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L6P0CJ89 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L7P0CJ90 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 CA6P23280 308 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 RPL4P36578 427 aaKnown RBP10.43□□□□□ -0.74
SCAF11-208ENST00000546534 KIR2DS4P43632 304 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 HIST1H3AP68431 136 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 KLRD1Q13241 179 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 ANKDD1AQ495B1 522 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 HIST2H3PS2Q5TEC6 136 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 FOXB2Q5VYV0 432 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 C11orf88Q6PI97 169 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
SCAF11-208ENST00000546534 HIST2H3AQ71DI3 136 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 CALHM3Q86XJ0 350 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 GLB1L2Q8IW92 636 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 NRMQ8IXM6 262 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 PNKDQ8N490 385 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 SVOPQ8N4V2 548 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DPP10Q8N608 796 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 SPERTQ8NA61 448 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 LY6G5BQ8NDX9 201 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 SLCO4A1Q96BD0 722 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 COQ7Q99807 217 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 CCDC28BQ9BUN5 200 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 HDHD2Q9H0R4 259 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 MMP28Q9H239 520 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 C1orf123Q9NWV4 160 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4Q9UBX2 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 TENM3Q9P273 2699 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 KHDRBS3O75525 346 aaKnown RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 MPIG6BO95866 241 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 PAHP00439 452 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 CD14P08571 375 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ZNF26P17031 533 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 EEF1B2P24534 225 aaKnown RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 SAA4P35542 130 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 SLC9A3P48764 834 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ELF3P78545 371 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ST3GAL3Q11203 375 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 KCNMB1Q16558 191 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 MEP1BQ16820 701 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 WDR93Q6P2C0 686 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 CORO6Q6QEF8 472 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 CCBE1Q6UXH8 406 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ZNF826PQ6ZT77 177 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 FAM122BQ7Z309 247 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 GCSAMQ8N6F7 178 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 Q8N7P7 452 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 GJC3Q8NFK1 279 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 OR4S1Q8NGB4 309 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 SPRYD4Q8WW59 207 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-208ENST00000546534 ZNF570Q96NI8 536 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 SYT4Q9H2B2 425 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 KAAG1Q9UBP8 84 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 RPS6KA6Q9UK32 745 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 A4GNTQ9UNA3 340 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 POLR1DQ9Y2S0 133 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 LHFPL6Q9Y693 200 aa10.42□□□□□ -0.74
SCAF11-208ENST00000546534 IGHV3OR15-7A0A075B7D8 119 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 MEIOCA2RUB1 952 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 H3BUX3 64 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 K7EIL1 84 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 VSIG10L2P0DP72 767 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 SLC18A1P54219 525 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 PRKCDQ05655 676 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 KRR1Q13601 381 aaKnown RBP10.41□□□□□ -0.74
SCAF11-208ENST00000546534 NFYCQ13952 458 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 PGAP1Q75T13 922 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 NAA40Q86UY6 237 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 OR4C13Q8NGP0 309 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 TNFRSF14Q92956 283 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 C7orf26Q96N11 449 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 ADAT1Q9BUB4 502 aaKnown RBP10.41□□□□□ -0.74
SCAF11-208ENST00000546534 SLC22A4Q9H015 551 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 NUAK2Q9H093 628 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 NKIRAS1Q9NYS0 192 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 RHCGQ9UBD6 479 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 NOP16Q9Y3C1 178 aaKnown RBP10.41□□□□□ -0.74
SCAF11-208ENST00000546534 MAB21L2Q9Y586 359 aa10.41□□□□□ -0.74
SCAF11-208ENST00000546534 CD300LBA8K4G0 201 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 CDC42EP2O14613 210 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 ANGPT2O15123 496 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 GMDSO60547 372 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 LHBP01229 141 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 LCATP04180 440 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 GRPP07492 148 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 GPR4P46093 362 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 YAP1P46937 504 aaKnown RBP10.4□□□□□ -0.74
SCAF11-208ENST00000546534 EMX1Q04741 257 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-208ENST00000546534 MALLQ13021 153 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms