RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MS4A5Q9H3V2 200 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 BRD7Q9NPI1 651 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF319Q9P2F9 582 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 TIMM8AO60220 97 aaPredicted RBP17.49■□□□□ 0.39
HMGA2-211ENST00000545998 HSPA13P48723 471 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 KRTAP1-3Q8IUG1 177 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 ACBD7Q8N6N7 88 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 OR52H1Q8NGJ2 320 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 OR2AE1Q8NHA4 323 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 GTF3AQ92664 365 aaKnown RBP17.49■□□□□ 0.39
HMGA2-211ENST00000545998 REPIN1Q9BWE0 567 aaKnown RBP17.49■□□□□ 0.39
HMGA2-211ENST00000545998 RAB1BQ9H0U4 201 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 FAM206AQ9NX38 181 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 MYRFQ9Y2G1 1151 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 TBX1O43435 398 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 XRCC2O43543 280 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 FADS2O95864 444 aaKnown RBP17.48■□□□□ 0.39
HMGA2-211ENST00000545998 IGHA1P01876 353 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 KLHL22Q53GT1 634 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 OR2T2Q6IF00 324 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 PGAP1Q75T13 922 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 OR52I1Q8NGK6 324 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 SNX33Q8WV41 574 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 SPSB4Q96A44 273 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 PGAM5Q96HS1 289 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 OR10A2Q9H208 303 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 TPK1Q9H3S4 243 aa17.48■□□□□ 0.39
HMGA2-211ENST00000545998 CGGBP1Q9UFW8 167 aaPredicted RBP17.48■□□□□ 0.39
HMGA2-211ENST00000545998 TMEM269A0A1B0GVZ9 245 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 DAPL1A0PJW8 107 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 METTL15A6NJ78 407 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 ACOD1A6NK06 481 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 C17orf100A8MU93 164 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 SRSF10O75494 262 aaKnown RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 SULT1C4O75897 302 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 F12P00748 615 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 MT-ND5P03915 603 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 KRT8P05787 483 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 LIPAP38571 399 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 MMP16P51512 607 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 EFNA4P52798 201 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF829Q3KNS6 432 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 PRSS57Q6UWY2 283 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 MRPL21Q7Z2W9 205 aaKnown RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 SGK3Q96BR1 496 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 ANKRD60Q9BZ19 345 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 BARX1Q9HBU1 254 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 FGF20Q9NP95 211 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 CYSLTR2Q9NS75 346 aa17.47■□□□□ 0.39
HMGA2-211ENST00000545998 FLNAP21333 2647 aaKnown RBP17.47■□□□□ 0.39
HMGA2-211ENST00000545998 PLSCR5A0PG75 271 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 IQCF6A8MYZ5 107 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 PNPP00491 289 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 SELEP16581 610 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF81P51508 661 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 PRSS12P56730 875 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 CDONQ4KMG0 1287 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 Q5PR19 223 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 PLEKHG7Q6ZR37 379 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 YIPF7Q8N8F6 280 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 OR8B12Q8NGG6 310 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 OPA3Q9H6K4 179 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 INPP5EQ9NRR6 644 aa17.46■□□□□ 0.39
HMGA2-211ENST00000545998 ZSCAN5BA6NJL1 495 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 ERCC1P07992 297 aaPredicted RBP17.45■□□□□ 0.38
HMGA2-211ENST00000545998 MYF6P23409 242 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 MFGE8Q08431 387 aaPredicted RBP17.45■□□□□ 0.38
HMGA2-211ENST00000545998 TIGD6Q17RP2 521 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 LIPNQ5VXI9 398 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 SHEQ5VZ18 495 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 Q6ZR03 302 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 OR5AS1Q8N127 324 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 NEU4Q8WWR8 484 aaPredicted RBP17.45■□□□□ 0.38
HMGA2-211ENST00000545998 REEP6Q96HR9 211 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 ZNF649Q9BS31 505 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 RGCCQ9H4X1 137 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 MSL2Q9HCI7 577 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 R4GMQ9 66 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 FAM20BO75063 409 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 LY6HO94772 140 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 GALEQ14376 348 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 TP53I3Q53FA7 332 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 ZMAT1Q5H9K5 638 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 LHFPL3Q86UP9 236 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 OR8G5Q8NG78 346 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 RHNO1Q9BSD3 238 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 JAM3Q9BX67 310 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 PBOV1Q9GZY1 135 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 G6PC2Q9NQR9 355 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 PLCXD1Q9NUJ7 323 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 ERVK13-1Q9NX77 482 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 NKIRAS2Q9NYR9 191 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 NUFIP1Q9UHK0 495 aaKnown RBP17.45■□□□□ 0.38
HMGA2-211ENST00000545998 GNG8Q9UK08 70 aa17.45■□□□□ 0.38
HMGA2-211ENST00000545998 HIVEP1P15822 2718 aa17.44■□□□□ 0.38
HMGA2-211ENST00000545998 IRGMA1A4Y4 181 aa17.44■□□□□ 0.38
HMGA2-211ENST00000545998 SSX4O60224 188 aa17.44■□□□□ 0.38
HMGA2-211ENST00000545998 LILRA1O75019 489 aa17.44■□□□□ 0.38
HMGA2-211ENST00000545998 RPP14O95059 124 aaKnown RBP17.44■□□□□ 0.38
HMGA2-211ENST00000545998 IGHV1-46P01743 117 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms