RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 COPS3Q9UNS2 423 aa11.92□□□□□ -0.5
TSEN54-203ENST00000545228 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
TSEN54-203ENST00000545228 ITPR3Q14573 2671 aa11.92□□□□□ -0.5
TSEN54-203ENST00000545228 RTTNQ86VV8 2226 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 J3QRE1 110 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 M0R233 179 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 TBX1O43435 398 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 APOL3O95236 402 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ZNF12P17014 697 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 DDOSTP39656 456 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 GBX2P52951 348 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 TAS2R43P59537 309 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ST3GAL4Q11206 333 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ADIPOQQ15848 244 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 SMN1Q16637 294 aaKnown RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 NKPD1Q17RQ9 610 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 DEFB113Q30KQ7 82 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 BCL2L15Q5TBC7 163 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 FBXW12Q6X9E4 464 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 RFPL4BQ6ZWI9 263 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 AHSA2Q719I0 299 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 PGAP1Q75T13 922 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ZNF101Q8IZC7 436 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 SLC7A6Q92536 515 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 SLC22A4Q9H015 551 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ERVK13-1Q9NX77 482 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 DUSP13Q9UII6 198 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 GTF2A1LQ9UNN4 478 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 ERGIC3Q9Y282 383 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 CAB39Q9Y376 341 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-203ENST00000545228 R4GMQ9 66 aa11.91□□□□□ -0.5
TSEN54-203ENST00000545228 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 A0A0U1RQV5 110 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 TIMM8AO60220 97 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 GPRIN2O60269 458 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 MRPS14O60783 128 aaKnown RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 HTR1AP08908 422 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 UBCP0CG48 685 aaKnown RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 PSKH1P11801 424 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 EEF1B2P24534 225 aaKnown RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 PPOXP50336 477 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 HCCSP53701 268 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 COMMD2Q86X83 199 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 OR52N1Q8NH53 320 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 KLF14Q8TD94 323 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 MARS2Q96GW9 593 aaKnown RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 AMELYQ99218 206 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 BARX1Q9HBU1 254 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 ABCB9Q9NP78 766 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 AASSQ9UDR5 926 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 NUFIP1Q9UHK0 495 aaKnown RBP11.9□□□□□ -0.5
TSEN54-203ENST00000545228 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
TSEN54-203ENST00000545228 XPNPEP2O43895 674 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 DANCRP0C864 163 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 KITLGP21583 273 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 TNFSF4P23510 183 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 ZNF85Q03923 595 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 LIPNQ5VXI9 398 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 RNLSQ5VYX0 342 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 LHFPL3Q86UP9 236 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 SPRYD4Q8WW59 207 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-203ENST00000545228 GGHQ92820 318 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 C4orf36Q96KX1 117 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 TRAF4Q9BUZ4 470 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-203ENST00000545228 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 TTTY10Q9BZA0 68 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 COMMD4Q9H0A8 199 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 BRD7Q9NPI1 651 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 TRIM36Q9NQ86 728 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 PTTG3PQ9NZH4 202 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 MRM2Q9UI43 246 aaKnown RBP11.89□□□□□ -0.51
TSEN54-203ENST00000545228 ZDHHC8Q9ULC8 765 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 STARD10Q9Y365 291 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 PCDHGB5Q9Y5G0 923 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 N6AMT1Q9Y5N5 214 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 ROS1P08922 2347 aa11.89□□□□□ -0.51
TSEN54-203ENST00000545228 TMEM129A0AVI4 362 aa11.88□□□□□ -0.51
TSEN54-203ENST00000545228 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms