RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 N4BP2L1Q5TBK1 243 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 FHL5Q5TD97 284 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 SPOPLQ6IQ16 392 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 LCN12Q6JVE5 192 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 TMEM220Q6QAJ8 160 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 EIF3MQ7L2H7 374 aaKnown RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 LUZP2Q86TE4 346 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 BIVMQ86UB2 503 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CSGALNACT2Q8N6G5 542 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 LRRC52Q8N7C0 313 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 OR5B3Q8NH48 314 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 LINC01006Q8NI28 216 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 UCN3Q969E3 161 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CCDC126Q96EE4 140 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 RACGAP1Q9H0H5 632 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 DEFB127Q9H1M4 99 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 EXO5Q9H790 373 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CCL28Q9NRJ3 127 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 AGPAT3Q9NRZ7 376 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 NEUROG3Q9Y4Z2 214 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CDH10Q9Y6N8 788 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 FAM208BQ5VWN6 2430 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 A0A1B0GTQ1 180 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 FAM92AA1XBS5 289 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 RRP8O43159 456 aaKnown RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 EMC8O43402 210 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 COCHO43405 550 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ACTL6AO96019 429 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ALDOBP05062 364 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ZDHHC11BP0C7U3 371 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ZNF806P0C7X5 589 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ICAM2P13598 275 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 PRDX3P30048 256 aaKnown RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 MAGEA1P43355 309 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 GPR6P46095 362 aaPredicted RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 CDKN1BP46527 198 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 RGS8P57771 180 aaPredicted RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 ACTA2P62736 377 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ACTG2P63267 376 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ACTC1P68032 377 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ACTA1P68133 377 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 CYP24A1Q07973 514 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 MERTKQ12866 999 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 FZD2Q14332 565 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 DMC1Q14565 340 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 KIAA0087Q14695 138 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 HIKESHIQ53FT3 197 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 AGBL2Q5U5Z8 902 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ANKRD26P1Q6NSI1 321 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 RNF165Q6ZSG1 346 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 BZW1Q7L1Q6 419 aaKnown RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 NELFCDQ8IXH7 590 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 FBXL13Q8NEE6 735 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 GPR151Q8TDV0 419 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 C2orf15Q8WU43 125 aaKnown RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 NRGNQ92686 78 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 SGK3Q96BR1 496 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 MSANTD3Q96H12 275 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 RASL11BQ9BPW5 248 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 ROGDIQ9GZN7 287 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 UGT1A7Q9HAW7 530 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 UGT1A10Q9HAW8 530 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 UGT1A8Q9HAW9 530 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 MRPL47Q9HD33 250 aaKnown RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 PRR34Q9NV39 138 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 DMAC2Q9NW81 257 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 IL37Q9NZH6 218 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 PDP1Q9P0J1 537 aaPredicted RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 XCL2Q9UBD3 114 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 PACSIN2Q9UNF0 486 aaPredicted RBP2.59□□□□□ -2
SCFD1-207ENST00000544052 MMP24Q9Y5R2 645 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 KIF25-AS1Q9Y6Z4 181 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 SHROOM3Q8TF72 1996 aa2.59□□□□□ -2
SCFD1-207ENST00000544052 GOLGA4Q13439 2230 aaKnown RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 COL5A1P20908 1838 aaPredicted RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 BAHCC1Q9P281 2608 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 APC2O95996 2303 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 TRBV11-1A0A0K0K1C0 115 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 C12orf71A8MTZ7 269 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 MGRN1O60291 552 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 HUS1O60921 280 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 S100A9P06702 114 aaKnown RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 RALBP11234 206 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 HTR1EP28566 365 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 P2RY2P41231 377 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 TFPI2P48307 235 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 RORCP51449 518 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 CCNHP51946 323 aaPredicted RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 SLC7A9P82251 487 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 KDSRQ06136 332 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 SMARCB1Q12824 385 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 ILKQ13418 452 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 PDGFRLQ15198 375 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 STK11Q15831 433 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 SNRNP35Q16560 246 aaKnown RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 CCDC14Q49A88 953 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 FBXO48Q5FWF7 155 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 CASC10Q5T4H9 136 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms