RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 LAT2Q9GZY6 243 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 OR51B6Q9H340 312 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 SP140LQ9H930 580 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 FGF20Q9NP95 211 aaPredicted RBP8.2□□□□□ -1.1
CHFR-220ENST00000541817 ISYNA1Q9NPH2 558 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 MAN2C1Q9NTJ4 1040 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 DCAF16Q9NXF7 216 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 H2AFY2Q9P0M6 372 aaPredicted RBP8.2□□□□□ -1.1
CHFR-220ENST00000541817 ZNF443Q9Y2A4 671 aaPredicted RBP8.2□□□□□ -1.1
CHFR-220ENST00000541817 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
CHFR-220ENST00000541817 WDR45Q9Y484 360 aa8.2□□□□□ -1.1
CHFR-220ENST00000541817 A0A087WUU8 490 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 PRODHO43272 600 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 PRKYO43930 277 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 GPR137BO60478 399 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 EIF4E2O60573 245 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 GPX5O75715 221 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 AK1P00568 194 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 IGHMP01871 453 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 HLA-HP01893 362 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 APOA1P02647 267 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 DBIP07108 87 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 IFI6P09912 130 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 SBK2P0C263 348 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 CD79AP11912 226 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 LCN1P31025 176 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 GLRXP35754 106 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 RORCP51449 518 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 ATP12AP54707 1039 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 RAB40BQ12829 278 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 SKP2Q13309 424 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 HFEQ30201 348 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 NIPAL3Q6P499 406 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 ZCCHC12Q6PEW1 402 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 ZNF620Q6ZNG0 422 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 Q6ZSV7 163 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 C9orf139Q6ZV77 190 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 HMGN2P46Q86SG4 172 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 COMTD1Q86VU5 262 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 CLIP4Q8N3C7 705 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 FAM169BQ8N8A8 192 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 OR52I1Q8NGK6 324 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 SLC25A43Q8WUT9 341 aaPredicted RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 ST8SIA1Q92185 356 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 PMM1Q92871 262 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 RFKQ969G6 155 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 SLC41A3Q96GZ6 507 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 LRR1Q96L50 414 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 DCLRE1CQ96SD1 692 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 CDADC1Q9BWV3 514 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 TAPBPLQ9BX59 468 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 PIGUQ9H490 435 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 FN3KRPQ9HA64 309 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 HINT3Q9NQE9 182 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 MRPS18AQ9NVS2 196 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 CHRNA9Q9UGM1 479 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 LSM2Q9Y333 95 aaKnown RBP8.19□□□□□ -1.1
CHFR-220ENST00000541817 HDGFL3Q9Y3E1 203 aa8.19□□□□□ -1.1
CHFR-220ENST00000541817 PPIAL4EA0A075B759 164 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 PPIAL4CA0A0B4J2A2 164 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 WI2-2373I1.2A0A1W2PRP0 233 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 TMEM72A0PK05 275 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ZC3H12DA2A288 527 aaKnown RBP8.18□□□□□ -1.1
CHFR-220ENST00000541817 PPIAL4DF5H284 164 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 TBX1O43435 398 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 STX11O75558 287 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 MELTFP08582 738 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 PPIAL4FP0DN26 164 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ZNF35P13682 527 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 FPR3P25089 353 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ARR3P36575 388 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 WNT4P56705 351 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ERVS71-1P61550 626 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 SLC35A1P78382 337 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 PAX8Q06710 450 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 EGR3Q06889 387 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 GPR68Q15743 365 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 SSX1Q16384 188 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 SPRNQ5BIV9 151 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 FRRS1Q6ZNA5 592 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 MBOAT2Q6ZWT7 520 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 PARP16Q8N5Y8 322 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 CLDN22Q8N7P3 220 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 POC5Q8NA72 575 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ZNF563Q8TA94 476 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 RNFT2Q96EX2 444 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 FAM46AQ96IP4 442 aaKnown RBP8.18□□□□□ -1.1
CHFR-220ENST00000541817 RNF167Q9H6Y7 350 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 EGLN3Q9H6Z9 239 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 SMURF1Q9HCE7 757 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 POLE3Q9NRF9 147 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 DECR2Q9NUI1 292 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 CLEC2DQ9UHP7 191 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 KCNE5Q9UJ90 142 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 ZNF346Q9UL40 294 aaKnown RBP8.18□□□□□ -1.1
CHFR-220ENST00000541817 GSTK1Q9Y2Q3 226 aa8.18□□□□□ -1.1
CHFR-220ENST00000541817 TRAPPC13A5PLN9 417 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms