RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PITPNBP48739 271 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 DGCR2P98153 550 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 NRARPQ7Z6K4 114 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 GLCCI1Q86VQ1 547 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 ZNF100Q8IYN0 542 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 C9orf106Q8NAJ2 232 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 OR4D6Q8NGJ1 314 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 SGK3Q96BR1 496 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 SPACA5Q96QH8 159 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 HDHD2Q9H0R4 259 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 MRPS7Q9Y2R9 242 aaKnown RBP10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 ACACAQ13085 2346 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CACNA1GO43497 2377 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 IGF2RP11717 2491 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 IGKV1-9A0A0C4DH69 117 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 TMEM272A0A1B0GTI8 110 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 TTLL8A6PVC2 850 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 SLC17A2O00624 439 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 EEF1E1O43324 174 aaKnown RBP10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 KDM4BO94953 1096 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 IL18BPO95998 194 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 PTBP1P26599 531 aaKnown RBP eCLIP10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 POU3F4P49335 361 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 TNK1Q13470 666 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 RAB11BQ15907 218 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 GLYATL3Q5SZD4 288 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 OR10K2Q6IF99 312 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CRIP3Q6Q6R5 217 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 OR1M1Q8NGA1 313 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 THRSPQ92748 146 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 ZFP3Q96NJ6 502 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 AUNIPQ9H7T9 357 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 UPB1Q9UBR1 384 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 TIMM10BQ9Y5J6 103 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 LOC100509620A0A075B734 347 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 LOC390937A0A1W2PQ73 354 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 SS18L1O75177 396 aaPredicted RBP10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 PTTG1O95997 202 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 CD3GP09693 182 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 CCL2P13500 99 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 PTH2RP49190 550 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 ASAH1Q13510 395 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 GUSBP1Q15486 140 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 C2orf76Q3KRA6 126 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 HIKESHIQ53FT3 197 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 CCBE1Q6UXH8 406 aaPredicted RBP10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 DOK3Q7L591 496 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 ZNF627Q7L945 461 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 P4HA3Q7Z4N8 544 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 JAGN1Q8N5M9 183 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 EXTL1Q92935 676 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 FAM3DQ96BQ1 224 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 ABHD17AQ96GS6 310 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 ABCG5Q9H222 651 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 SP140LQ9H930 580 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 CKLFQ9UBR5 152 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 TP53TG5Q9Y2B4 290 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 RAXQ9Y2V3 346 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 BOD1L1Q8NFC6 3051 aa10.69□□□□□ -0.7
AP003559.1-201ENST00000540906 FUOMA2VDF0 154 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 FAHP16930 419 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 ZNF20P17024 532 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 CDK2P24941 298 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 ACKR3P25106 362 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 BDKRB2P30411 391 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 TALDO1P37837 337 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 OR3A2P47893 321 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SRP9P49458 86 aaKnown RBP10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SCN1BQ07699 218 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 FOXF2Q12947 444 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 TBR1Q16650 682 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 ACSF3Q4G176 576 aaPredicted RBP10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 C1orf100Q5SVJ3 147 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 PYHIN1Q6K0P9 492 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SEM1Q6ZVN7 128 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SNRNP27Q8WVK2 155 aaKnown RBP10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 YIPF5Q969M3 257 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 HAVCR1Q96D42 359 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 GAL3ST1Q99999 423 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 CNTD2Q9H8S5 307 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 DKK4Q9UBT3 224 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 V9GYS6 101 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 SVILO95425 2214 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 A0A0U1RQV5 110 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 LDLRAD4O15165 306 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 UBL3O95164 117 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 EDN3P14138 238 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 HTR2CP28335 458 aa10.68□□□□□ -0.7
AP003559.1-201ENST00000540906 NRN1LQ496H8 165 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms