RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ANGPTL5Q86XS5 388 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM104Q8NE00 496 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 OR4K15Q8NH41 348 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF721Q8TF20 911 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ARL5BQ96KC2 179 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 FRG2CA6NGY1 282 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 SLC2A1P11166 492 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 CD79AP11912 226 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 SLC6A8P48029 635 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 HOXA1P49639 335 aaPredicted RBP18.05■□□□□ 0.48
TMEM260-203ENST00000539559 PLCXD2Q0VAA5 305 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 SGCAQ16586 387 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 MST1LQ2TV78 715 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 AWAT2Q6E213 333 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF585AQ6P3V2 769 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 ETV3LQ6ZN32 361 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF101Q8IZC7 436 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 DUSP15Q9H1R2 295 aaPredicted RBP18.05■□□□□ 0.48
TMEM260-203ENST00000539559 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 CPAMD8Q8IZJ3 1885 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 MTRF1O75570 445 aaKnown RBP18.05■□□□□ 0.48
TMEM260-203ENST00000539559 CD37P11049 281 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 ID4P47928 161 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 MICBQ29980 383 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 SYT13Q7L8C5 426 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 RXFP4Q8TDU9 374 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 NUDT22Q9BRQ3 303 aa18.05■□□□□ 0.48
TMEM260-203ENST00000539559 A0A0A6YYD4 124 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 TEX13DA0A0J9YY54 714 aaPredicted RBP18.04■□□□□ 0.48
TMEM260-203ENST00000539559 OR5K4A6NMS3 321 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 F8VVB4 439 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 F8VWA3 439 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 FAM157CP0CG43 387 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 PGCP20142 388 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 AKR1C3P42330 323 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 QRFPP83859 136 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 RBM39Q14498 530 aaKnown RBP18.04■□□□□ 0.48
TMEM260-203ENST00000539559 PHF19Q5T6S3 580 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SPAG16Q8N0X2 631 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 RNF141Q8WVD5 230 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 UQCC1Q9NVA1 299 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM131Q92545 1883 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 A0A0A6YYH2 397 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 A6NJ64 397 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 DBX1A6NMT0 343 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SHISA8B8ZZ34 492 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SOCS1O15524 211 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 NPIPB7O75200 414 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 TTRP02766 147 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 BCKDHBP21953 392 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SLC26A5P58743 744 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 PDZK1IP1Q13113 114 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 GFOD2Q3B7J2 385 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 DHRS7BQ6IAN0 325 aaPredicted RBP18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SHISA6Q6ZSJ9 500 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 SLC29A4Q7RTT9 530 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 NUBPLQ8TB37 319 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 MAFIPQ8WZ33 124 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM230Q96A57 120 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 TCTN2Q96GX1 697 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 C5orf66Q9H5L9 145 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 COA4Q9NYJ1 87 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 CNTRLQ7Z7A1 2325 aa18.04■□□□□ 0.48
TMEM260-203ENST00000539559 ASXL3Q9C0F0 2248 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 SPTY2D1-AS1A0A0U1RR47 76 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM150CB9EJG8 249 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 SYT7O43581 403 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 NUDT21O43809 227 aaKnown RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 HTR3BO95264 441 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 MT-ATP6P00846 226 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 IGKV3-11P04433 115 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 MUC1P15941 1255 aaPredicted RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 ABOP16442 354 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 RFC3P40938 356 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 EMP2P54851 167 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 EBPQ15125 230 aaKnown RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 SLC30A7Q8NEW0 376 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 MESP1Q9BRJ9 268 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 LRRC61Q9BV99 259 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 CYB5R1Q9UHQ9 305 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 A8MVM7 634 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 AHSA1O95433 338 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 MPIG6BO95866 241 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 OPN1LWP04000 364 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 RCC1P18754 421 aaPredicted RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 RAB6AP20340 208 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 CRABP1P29762 137 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 GABRA4P48169 554 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 POLR2HP52434 150 aaKnown RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 POU3F1Q03052 451 aaPredicted RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 PLAC9Q5JTB6 97 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 HLA-DQA1Q5Y7H0 255 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF704Q6ZNC4 412 aaPredicted RBP18.03■□□□□ 0.48
TMEM260-203ENST00000539559 DEFB119Q8N690 84 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 OR1M1Q8NGA1 313 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 STOML3Q8TAV4 291 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM41AQ96HV5 264 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM100Q9NV29 134 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 GSKIPQ9P0R6 139 aa18.03■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF107Q9UII5 783 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms