RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CNTNAP3BQ96NU0 1288 aa8.6□□□□□ -1.03
CDH13-204ENST00000539548 PBOV1Q9GZY1 135 aa8.6□□□□□ -1.03
CDH13-204ENST00000539548 PTGES2Q9H7Z7 377 aa8.6□□□□□ -1.03
CDH13-204ENST00000539548 COPS7AQ9UBW8 275 aa8.6□□□□□ -1.03
CDH13-204ENST00000539548 GPR132Q9UNW8 380 aa8.6□□□□□ -1.03
CDH13-204ENST00000539548 IGKV1D-43A0A0B4J1Z2 117 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 A0A1W2PPC4 97 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 EPOPA6NHQ4 379 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 KCNAB3O43448 404 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 ACTL6AO96019 429 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 FAM157CP0CG43 387 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 SLC6A9P48067 706 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 CTAG1AP78358 180 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 AIMP2Q13155 320 aaKnown RBP8.59□□□□□ -1.03
CDH13-204ENST00000539548 STK11Q15831 433 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 VAX1Q5SQQ9 334 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 TMEM71Q6P5X7 295 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 DRAM2Q6UX65 266 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 ANGPTL5Q86XS5 388 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 WDFY1Q8IWB7 410 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 SLAMF6Q96DU3 332 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
CDH13-204ENST00000539548 RAB33BQ9H082 229 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 MMP26Q9NRE1 261 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 CYP8B1Q9UNU6 501 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 SLCO1B1Q9Y6L6 691 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 RP1P56715 2156 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 F8W036 122 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 H0YIZ8 118 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 PPM1FP49593 454 aaPredicted RBP8.59□□□□□ -1.03
CDH13-204ENST00000539548 AKR1C2P52895 323 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 EMP2P54851 167 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 FOXK1P85037 733 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 HSF1Q00613 529 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 AKR1C1Q04828 323 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 OR7A5Q15622 319 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 NSDHLQ15738 373 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 SGCAQ16586 387 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 ACTBL2Q562R1 376 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 AWAT2Q6E213 333 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 PTCRAQ6ISU1 281 aaPredicted RBP8.59□□□□□ -1.03
CDH13-204ENST00000539548 IL34Q6ZMJ4 242 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 PGAP1Q75T13 922 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 RAB11FIP2Q7L804 512 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 GKN2Q86XP6 184 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 MISPQ8IVT2 679 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 ARRDC1Q8N5I2 433 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 OR10H5Q8NGA6 315 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 OR13C9Q8NGT0 318 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 C11orf40Q8WZ69 217 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 ST8SIA1Q92185 356 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 RELTQ969Z4 430 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 LPAR5Q9H1C0 372 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 CHST11Q9NPF2 352 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 CLEC1BQ9P126 229 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 MLXQ9UH92 298 aa8.59□□□□□ -1.03
CDH13-204ENST00000539548 PHF3Q92576 2039 aaKnown RBP8.59□□□□□ -1.04
CDH13-204ENST00000539548 SNAPINO95295 136 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 SFT2D2O95562 160 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZNF93P35789 620 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 APOBEC1P41238 236 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 MST1LQ2TV78 715 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 PLEKHN1Q494U1 663 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 PRSS54Q6PEW0 395 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 TMEM88Q6PEY1 159 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 NAA40Q86UY6 237 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 C17orf82Q86X59 251 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZSCAN4Q8NAM6 433 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 OR10S1Q8NGN2 331 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 OR4A4PQ8NGN8 299 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 OR2I1PQ8NGU4 316 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZDHHC12Q96GR4 267 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZC3H10Q96K80 434 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 ARL5BQ96KC2 179 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 SCGB3A2Q96PL1 93 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 SEC11CQ9BY50 192 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 FOXQ1Q9C009 403 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 TLNRD1Q9H1K6 362 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 KLHL13Q9P2N7 655 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 DHCR7Q9UBM7 475 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 PISDQ9UG56 409 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 CD207Q9UJ71 328 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 A0A0A6YYD4 124 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 ANKUB1A6NFN9 424 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZNF98A6NK75 572 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 DLL1O00548 723 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 MTRF1O75570 445 aaKnown RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 FBLP22087 321 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms