RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SMCO3A2RU48 225 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 PDZK1P1A8MUH7 402 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 LHBP01229 141 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CT45A6P0DMU7 189 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CT45A5P0DMU8 189 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CT45A7P0DMV0 189 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 TAS2R46P59540 309 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 MEF2CQ06413 473 aaPredicted RBP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 SIGLEC14Q08ET2 396 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 DGCR6Q14129 220 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 ZNF266Q14584 549 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 KLHL12Q53G59 568 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CT45A1Q5HYN5 189 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 SASS6Q6UVJ0 657 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 Q6ZSR3 168 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 MBOAT2Q6ZWT7 520 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CMC1Q7Z7K0 106 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 MDP1Q86V88 176 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 IQCKQ8N0W5 287 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 GTPBP8Q8N3Z3 284 aaPredicted RBP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 SNX31Q8N9S9 440 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 OR4M1Q8NGD0 313 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 OR6Q1Q8NGQ2 317 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CT45A3Q8NHU0 189 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 DUS3LQ96G46 650 aaKnown RBP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 GPR82Q96P67 336 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 PLIN2Q99541 437 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 SEC22CQ9BRL7 303 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CENPKQ9BS16 269 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 MARVELD1Q9BSK0 173 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 ANKRA2Q9H9E1 313 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 VPS37BQ9H9H4 285 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 CCDC59Q9P031 241 aaKnown RBP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 PDP1Q9P0J1 537 aaPredicted RBP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 AKNAQ7Z591 1439 aa1.65□□□□□ -2.15
CCDC7-209ENST00000539197 NSD2O96028 1365 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 SMIM26A0A096LP01 95 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 A0A0J9YXV3 536 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 PRAMEF26H0Y7S4 382 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 DNALI1O14645 258 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-209ENST00000539197 KLHL2O95198 593 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 TSPAN13O95857 204 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 RPN2P04844 631 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 TROVE2P10155 538 aaKnown RBP eCLIP1.64□□□□□ -2.15
CCDC7-209ENST00000539197 HSPD1P10809 573 aaKnown RBP1.64□□□□□ -2.15
CCDC7-209ENST00000539197 GBE1Q04446 702 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 BIKQ13323 160 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 PNOCQ13519 176 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 IDI1Q13907 227 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 ALKBH6Q3KRA9 238 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 DEFB134Q4QY38 66 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 XKR7Q5GH72 579 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 LRRC66Q68CR7 880 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 STUMQ69YW2 141 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 HCP5Q6MZN7 132 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 DEGS2Q6QHC5 323 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 ADM2Q7Z4H4 148 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 BBS5Q8N3I7 341 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 ZFP3Q96NJ6 502 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 NAP1L5Q96NT1 182 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-209ENST00000539197 FAM192AQ9GZU8 254 aa1.64□□□□□ -2.15
CCDC7-209ENST00000539197 RABL2AQ9UBK7 228 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-209ENST00000539197 TRIP11Q15643 1979 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 IGKV1-8A0A0C4DH67 115 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 TNFRSF11BO00300 401 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 PLPP1O14494 284 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 TAAR5O14804 337 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 CLOCKO15516 846 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 IGLV7-43P04211 117 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 PFN1P07737 140 aaKnown RBP1.63□□□□□ -2.15
CCDC7-209ENST00000539197 NCF4Q15080 339 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 RCN1Q15293 331 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 MRPL23Q16540 153 aaKnown RBP1.63□□□□□ -2.15
CCDC7-209ENST00000539197 TPTE2P1Q5T6R2 138 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 SLC8B1Q6J4K2 584 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 C12orf54Q6X4T0 127 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 NT5DC3Q86UY8 548 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 CMTM1Q8IZ96 169 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 ZNF645Q8N7E2 425 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 C11orf72Q8NBR9 251 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 GPR26Q8NDV2 337 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 OR2Z1Q8NG97 314 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 PANX1Q96RD7 426 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 TMEM243Q9BU79 118 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 OR51M1Q9H341 326 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 PLXNB1O43157 2135 aa1.63□□□□□ -2.15
CCDC7-209ENST00000539197 H7C0C1 242 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 SIRPB1O00241 398 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 LSM1O15116 133 aaKnown RBP1.62□□□□□ -2.15
CCDC7-209ENST00000539197 EIF3HO15372 352 aaKnown RBP eCLIP1.62□□□□□ -2.15
CCDC7-209ENST00000539197 DNAJB6O75190 326 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 WBP4O75554 376 aaKnown RBP1.62□□□□□ -2.15
CCDC7-209ENST00000539197 SCO1O75880 301 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 OR2J3O76001 311 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 SERPINE2P07093 398 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 NTF3P20783 257 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 ATP5OP48047 213 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 BTN1A1Q13410 526 aa1.62□□□□□ -2.15
CCDC7-209ENST00000539197 C1orf185Q5T7R7 199 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms