RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ICAM2P13598 275 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF20P17024 532 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 ENPP1P22413 925 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 OTX2P32243 289 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 MPLP40238 635 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 SGCAQ16586 387 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 B3GNTL1Q67FW5 361 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 FAM109AQ8N4B1 249 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 CT55Q8WUE5 264 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 RADILQ96JH8 1075 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 B3GNT4Q9C0J1 378 aa12.36□□□□□ -0.43
LIMK1-208ENST00000538333 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-208ENST00000538333 WDPCPO95876 746 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 RLN1P04808 185 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ERCC1P07992 297 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 TCN2P20062 427 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 SRD5A2P31213 254 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF93P35789 620 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 HIST1H3AP68431 136 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 DHODHQ02127 395 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 HIST2H3PS2Q5TEC6 136 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 TEX261Q6UWH6 196 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 C6orf15Q6UXA7 325 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 HIST2H3AQ71DI3 136 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 SSC4DQ8WTU2 575 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 C1orf147Q96MC9 270 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 CHIAQ9BZP6 476 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 CHST6Q9GZX3 395 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ALX4Q9H161 411 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 EIF3KQ9UBQ5 218 aaKnown RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 U3KQ87 197 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 FREM2Q5SZK8 3169 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 C5orf63A6NC05 138 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 M0QYG6 137 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 CYB5AP00167 134 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 HPP00738 406 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 SSPNQ14714 243 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 FAM57BQ71RH2 274 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 PGAP1Q75T13 922 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 DOK3Q7L591 496 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ANGPTL5Q86XS5 388 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 OR8H1Q8NGG4 311 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 NKD1Q969G9 470 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 WDR89Q96FK6 387 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 SPACA5Q96QH8 159 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
LIMK1-208ENST00000538333 SPRY4Q9C004 299 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 ARRDC1-AS1Q9H2J1 176 aa12.35□□□□□ -0.43
LIMK1-208ENST00000538333 LRRC3CA6NJW4 275 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-208ENST00000538333 SMAD9O15198 467 aaKnown RBP12.34□□□□□ -0.43
LIMK1-208ENST00000538333 DHHO43323 396 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 DNPH1O43598 174 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 P04436 131 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF81P51508 661 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 RAC3P60763 192 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 RAP2BP61225 183 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-208ENST00000538333 C2orf68Q2NKX9 166 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 AWAT2Q6E213 333 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 IDO2Q6ZQW0 420 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 MUC20Q8N307 709 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-208ENST00000538333 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 ZPBPQ9BS86 351 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 EXO5Q9H790 373 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 RTTNQ86VV8 2226 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 CNTRLQ7Z7A1 2325 aa12.34□□□□□ -0.43
LIMK1-208ENST00000538333 UBE2QL1A1L167 161 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 GJE1A6NN92 205 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 SSTR2P30874 369 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 GSK3AP49840 483 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 H2BFSP57053 126 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 IKZF1Q13422 519 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 RAB11FIP2Q7L804 512 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 GGNQ86UU5 652 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 C20orf196Q8IYI0 205 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 FTMTQ8N4E7 242 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF680Q8NEM1 530 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 LYZL4Q96KX0 146 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 SLC25A21Q9BQT8 299 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 SF3B5Q9BWJ5 86 aaKnown RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 FARSAQ9Y285 508 aaKnown RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 IGKV1-9A0A0C4DH69 117 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 PLSCR5A0PG75 271 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 LNP1A1A4G5 178 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 SCGNO76038 276 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 MPC2O95563 127 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms