RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 PLPP3O14495 311 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 SYNGR1O43759 233 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 NR2C1P13056 603 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 BMXP51813 675 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 MED21Q13503 144 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 SGCAQ16586 387 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 NANOGP8Q6NSW7 305 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CLDN22Q8N7P3 220 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 OR8G5Q8NG78 346 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 OR5J2Q8NH18 312 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 Q8TCH9 128 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 GATAD1Q8WUU5 269 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CGREF1Q99674 301 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CPPED1Q9BRF8 314 aaPredicted RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 ZNF649Q9BS31 505 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 SLC35A5Q9BS91 424 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 RMND5AQ9H871 391 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 MAGEL2Q9UJ55 1249 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 TIMM10BQ9Y5J6 103 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 DENRO43583 198 aaKnown RBP7.43□□□□□ -1.22
USP28-205ENST00000537706 BGLAPP02818 100 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 FCGR1AP12314 374 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 PRG2P13727 222 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 ETFAP13804 333 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 RAC2P15153 192 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 MRPS34P82930 218 aaKnown RBP7.43□□□□□ -1.22
USP28-205ENST00000537706 PSG4Q00888 419 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 CRIP3Q6Q6R5 217 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 MSANTD1Q6ZTZ1 278 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 MRPL41Q8IXM3 137 aaKnown RBP7.43□□□□□ -1.22
USP28-205ENST00000537706 ADGRG5Q8IZF4 528 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 KRTCAP2Q8N6L1 136 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 TRIML2Q8N7C3 387 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 BOLLQ8N9W6 283 aaKnown RBP7.43□□□□□ -1.22
USP28-205ENST00000537706 CANT1Q8WVQ1 401 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 SLC35B4Q969S0 331 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 MCHR2Q969V1 340 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 TESCQ96BS2 214 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 OR2H1Q9GZK4 316 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 ABCB10Q9NRK6 738 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 RNF7Q9UBF6 113 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 DNAJB11Q9UBS4 358 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 AP3M1Q9Y2T2 418 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 IFT52Q9Y366 437 aa7.43□□□□□ -1.22
USP28-205ENST00000537706 TCRBV5S2A0A599 114 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 A6NHS1 94 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 CENPBD1B2RD01 187 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 MCIDASD6RGH6 385 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 DVL1O14640 695 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 RNF13O43567 381 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 CHST1O43916 411 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 MT-ATP6P00846 226 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 IGF2P01344 180 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 LYNP07948 512 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 PGA4P0DJD7 388 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 PGA3P0DJD8 388 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 UMPSP11172 480 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 BMP2P12643 396 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 ECI1P42126 302 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 CLDN8P56748 225 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 KLRD1Q13241 179 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 DPY19L1Q2PZI1 675 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 ALG10BQ5I7T1 473 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 SPANXN4Q5MJ08 99 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 OR4F3Q6IEY1 312 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 SERPINA11Q86U17 422 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 CELF2-AS1Q8N7Q2 184 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 C19orf18Q8NEA5 215 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 OR5L1Q8NGL2 311 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 RORBQ92753 470 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 GTF2H4Q92759 462 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 MYDGFQ969H8 173 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 EME1Q96AY2 570 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 YY1AP1Q9H869 796 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 C20orf141Q9NUB4 165 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 P2RX2Q9UBL9 471 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 NOP16Q9Y3C1 178 aaKnown RBP7.42□□□□□ -1.22
USP28-205ENST00000537706 TRBV5-3A0A0A0MS03 114 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 IGHV3-64DA0A0J9YX35 117 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 VGLL3A8MV65 326 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 F5H5P2 479 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 FAM20BO75063 409 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 HTR5AP47898 357 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 CRISP3P54108 245 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 MTPNP58546 118 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 ERVK-25P63136 954 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 MELKQ14680 651 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 LRIF1Q5T3J3 769 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
USP28-205ENST00000537706 PACRGLQ8N7B6 248 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 SH3GL1Q99961 368 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 WNT5BQ9H1J7 359 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 SMURF1Q9HCE7 757 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 C8orf4Q9NR00 106 aa7.42□□□□□ -1.22
USP28-205ENST00000537706 TMEM100Q9NV29 134 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms