RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ELOVL3Q9HB03 270 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
CPSF7-216ENST00000536548 MBNL1Q9NR56 388 aaKnown RBP6.96□□□□□ -1.3
CPSF7-216ENST00000536548 RCC2Q9P258 522 aaKnown RBP6.96□□□□□ -1.3
CPSF7-216ENST00000536548 ASH2LQ9UBL3 628 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 METTL1Q9UBP6 276 aaKnown RBP6.96□□□□□ -1.3
CPSF7-216ENST00000536548 LPAR3Q9UBY5 353 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 VSIG4Q9Y279 399 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 FARSAQ9Y285 508 aaKnown RBP6.96□□□□□ -1.3
CPSF7-216ENST00000536548 MEMO1Q9Y316 297 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 CSAG2Q9Y5P2 127 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 APCP25054 2843 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 DOCK9Q9BZ29 2069 aa6.96□□□□□ -1.3
CPSF7-216ENST00000536548 EEF1E1-BLOC1S5C9J1V9 151 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 RNASEK-C17orf49H0YIS7 233 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CYR61O00622 381 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 XKRYO14609 159 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 LDLRAD4O15165 306 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 FBXO24O75426 580 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 AKR7A3O95154 331 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 MT-ND4LP03901 98 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ACAA1P09110 424 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CT62P0C5K7 136 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 PGAM2P15259 253 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF28P17035 718 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 IGFBP3P17936 291 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 C5AR1P21730 350 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 VAMP1P23763 118 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ACP1P24666 158 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CD27P26842 260 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ABCD3P28288 659 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 GRNP28799 593 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 EPHA8P29322 1005 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 PMELP40967 661 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 RIDAP52758 137 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 RPS21P63220 83 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 PSG6Q00889 435 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ROM1Q03395 351 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 TGIF1Q15583 401 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CST6Q15828 149 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 TBR1Q16650 682 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 EIF2S3LQ2VIR3 472 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 KLHL26Q53HC5 615 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 FAM209BQ5JX69 171 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 TMEM244Q5VVB8 128 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CDCP2Q5VXM1 449 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 OR10K2Q6IF99 312 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF585AQ6P3V2 769 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 FIGLAQ6QHK4 219 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 UNQ6126/PRO20091Q6UXV3 157 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF704Q6ZNC4 412 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 KCTD9Q7L273 389 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 TRAPPC6BQ86SZ2 158 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF679Q8IYX0 411 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 KDM8Q8N371 416 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 OR4A4PQ8NGN8 299 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ADAMTS17Q8TE56 1095 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 AQP3Q92482 292 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 SMIM8Q96KF7 97 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 SLC46A1Q96NT5 459 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 AQP10Q96PS8 301 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 OR5B2Q96R09 309 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 LMF1Q96S06 567 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 MICU1Q9BPX6 476 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 NUDT9Q9BW91 350 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 CST11Q9H112 138 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 RHOFQ9HBH0 211 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 RAB18Q9NP72 206 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 HHLA2Q9UM44 414 aa6.95□□□□□ -1.3
CPSF7-216ENST00000536548 MRPS33Q9Y291 106 aaKnown RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 COL27A1Q8IZC6 1860 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 NIPBLQ6KC79 2804 aaeCLIP6.95□□□□□ -1.3
CPSF7-216ENST00000536548 PRRC2CQ9Y520 2896 aaKnown RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 IGKV1D-42A0A075B6H8 117 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TBC1D3DA0A087WVF3 549 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 C13orf42A0A1B0GVH6 325 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 LOC390937A0A1W2PQ73 354 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 MEX3AA1L020 520 aaKnown RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 CPED1A4D0V7 1026 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 C5orf52A6NGY3 159 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF860A6NHJ4 632 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 OR6C76A6NM76 312 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 DBX1A6NMT0 343 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 COLCA2A8K830 154 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TBC1D3LB9A6J9 549 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SCAMP1O15126 338 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SSX5O60225 188 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 ALOX12BO75342 701 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 FARS2O95363 451 aaKnown RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SEMA4FO95754 770 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 IGKV1D-16P01601 117 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms