RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	ERVFRD-1	P60508	538 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	RPL27	P61353	136 aa	Known RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CSNK2B	P67870	215 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CD83	Q01151	205 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	GUCA2A	Q02747	115 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	IKZF1	Q13422	519 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	MPP2	Q14168	576 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	SELPLG	Q14242	412 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	GK2	Q14410	553 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	MEP1B	Q16820	701 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	PCK2	Q16822	640 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ALG10	Q5BKT4	473 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	LDLRAD2	Q5SZI1	272 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	INTS11	Q5TA45	600 aa	Known RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	TEX36	Q5VZQ5	186 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ZFAND6	Q6FIF0	208 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CORO6	Q6QEF8	472 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ADAMTSL5	Q6ZMM2	481 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ETV3L	Q6ZN32	361 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	MSANTD1	Q6ZTZ1	278 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CCDC121	Q6ZUS5	278 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	SYT9	Q86SS6	491 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	KRT73	Q86Y46	540 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	FUNDC1	Q8IVP5	155 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	C11orf53	Q8IXP5	236 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	IFT20	Q8IY31	132 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301		Q8N2B8	174 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	LINC00482	Q8N8I6	264 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	PCYOX1L	Q8NBM8	494 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	OR5T2	Q8NGG2	359 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	OR51G2	Q8NGK0	314 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	LRRC8C	Q8TDW0	803 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	NPRL2	Q8WTW4	380 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	TAMM41	Q96BW9	452 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	RASD2	Q96D21	266 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	RBP7	Q96R05	134 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	DCTN5	Q9BTE1	182 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	SPATA5L1	Q9BVQ7	753 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	NPFFR1	Q9GZQ6	430 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	MUC13	Q9H3R2	512 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	TMEM38A	Q9H6F2	299 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	PPP1R3E	Q9H7J1	279 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	FN3KRP	Q9HA64	309 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	ZIM2	Q9NZV7	527 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	KAAG1	Q9UBP8	84 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	LGALS13	Q9UHV8	139 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC13A4	Q9UKG4	626 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	RAB21	Q9UL25	225 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	PRPF19	Q9UMS4	504 aa	Known RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	NDUFAF1	Q9Y375	327 aa		4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	CAB39	Q9Y376	341 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD4-205	ENST00000536301	DSCAML1	Q8TD84	2053 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	hCG_1807616	A0A1W2PRN6	198 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	PRORSD1P	A6NEY8	169 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301		A6NLC8	198 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301		H0YHG0	523 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	SYNGR1	O43759	233 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	ANGPTL7	O43827	346 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	ECD	O95905	644 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	LHB	P01229	141 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	TUBG1	P23258	451 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	UBE2E1	P51965	193 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	GMFB	P60983	142 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	BLCAP	P62952	87 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC35A2	P78381	396 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	AQP6	Q13520	282 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	PIN1	Q13526	163 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	OR8G1	Q15617	311 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	DGUOK	Q16854	277 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	KRTAP27-1	Q3LI81	207 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	MEST	Q5EB52	335 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	LRIF1	Q5T3J3	769 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	COLCA1	Q6ZS62	124 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	C18orf65	Q6ZTR6	163 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	HDDC2	Q7Z4H3	204 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	LHFPL4	Q7Z7J7	247 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	CELF2-AS1	Q8N7Q2	184 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	OR5AU1	Q8NGC0	362 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	OR51A7	Q8NH64	312 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	TMEM239	Q8WW34	195 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	LIPH	Q8WWY8	451 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	H1FX	Q92522	213 aa	Known RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	TFAP2C	Q92754	450 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	ERGIC1	Q969X5	290 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	SLCO4A1	Q96BD0	722 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	RCC1L	Q96I51	464 aa	Known RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	MPP4	Q96JB8	637 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	LYZL4	Q96KX0	146 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301		Q96M85	177 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	PRR25	Q96S07	402 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	ADAT1	Q9BUB4	502 aa	Known RBP	4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	CHID1	Q9BWS9	393 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	MEGF9	Q9H1U4	602 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	CENPH	Q9H3R5	247 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	RERGL	Q9H628	205 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	RMND5A	Q9H871	391 aa		4.2	□□□□□ -1.74
CHD4-205	ENST00000536301	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms