RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MEP1BQ16820 701 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 FAM76BQ5HYJ3 339 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 WDR38Q5JTN6 314 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 LIN54Q6MZP7 749 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 OR5AP2Q8NGF4 316 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 OR5M8Q8NGP6 311 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 TSEN15Q8WW01 171 aaKnown RBP16.03■□□□□ 0.16
RAB40C-203ENST00000535977 MEGF10Q96KG7 1140 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 TGIF2Q9GZN2 237 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 CA14Q9ULX7 337 aa16.03■□□□□ 0.16
RAB40C-203ENST00000535977 TRAV8-7A0A075B6U6 113 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 MEIS3P1A6NDR6 274 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 NUDT19A8MXV4 375 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 SLC16A7O60669 478 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 CSRP1P21291 193 aaKnown RBP16.02■□□□□ 0.16
RAB40C-203ENST00000535977 HGFACQ04756 655 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 SSBP1Q04837 148 aaKnown RBP16.02■□□□□ 0.16
RAB40C-203ENST00000535977 PLA2G7Q13093 441 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
RAB40C-203ENST00000535977 GON4LQ3T8J9 2241 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 A6NLC8 198 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 AP4M1O00189 453 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 MT-ND4LP03901 98 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 SFTA3P0C7M3 94 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 GTF2F2P13984 249 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 CSNK1EP49674 416 aaKnown RBP16.02■□□□□ 0.15
RAB40C-203ENST00000535977 CFHR1Q03591 330 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 GLO1Q04760 184 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 ZP4Q12836 540 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 MST1LQ2TV78 715 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 ZNF383Q8NA42 475 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 NUBPLQ8TB37 319 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 PPP1R1CQ8WVI7 109 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 ST8SIA1Q92185 356 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 SLC39A7Q92504 469 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 DVL3Q92997 716 aaPredicted RBP16.02■□□□□ 0.15
RAB40C-203ENST00000535977 TOLLIPQ9H0E2 274 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 C1orf198Q9H425 327 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 OPA3Q9H6K4 179 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 SEC61A2Q9H9S3 476 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 PCDHGA1Q9Y5H4 931 aa16.02■□□□□ 0.15
RAB40C-203ENST00000535977 A0A1B0GTI1 187 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 GMFGO60234 142 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 PMS2P2O95744 297 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 CSF1P09603 554 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 SUMO3P55854 103 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-203ENST00000535977 GUCA2AQ02747 115 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 PYY3Q5JQD4 70 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 DNM1P34Q6PK57 102 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 TMED4Q7Z7H5 227 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 RNF141Q8WVD5 230 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 ZNF501Q96CX3 271 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-203ENST00000535977 FGF21Q9NSA1 209 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 A0A1B0GTH9 108 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 TOX3O15405 576 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-203ENST00000535977 CD2P06729 351 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 ITGA3P26006 1051 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 EFNA3P52797 238 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 TAS2R60P59551 318 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 INSM1Q01101 510 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-203ENST00000535977 IL34Q6ZMJ4 242 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 OR8S1Q8NH09 359 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 AKR7LQ8NHP1 331 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 SLAMF9Q96A28 289 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 MARS2Q96GW9 593 aaKnown RBP16.01■□□□□ 0.15
RAB40C-203ENST00000535977 RHOFQ9HBH0 211 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 CKLFQ9UBR5 152 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 FBXO4Q9UKT5 387 aa16.01■□□□□ 0.15
RAB40C-203ENST00000535977 A0A087WV48 116 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 NPIPB13A6NJU9 1138 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 NPIPB4C9JG80 1138 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 SLC17A2O00624 439 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 CD74P04233 296 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 ADH6P28332 368 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 RELQ04864 619 aaPredicted RBP16■□□□□ 0.15
RAB40C-203ENST00000535977 RAB11BQ15907 218 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 SSX2Q16385 188 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 NKAPLQ5M9Q1 402 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 PRAMEF17Q5VTA0 474 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 TMED6Q8WW62 240 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 DNASE2BQ8WZ79 361 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 C8orf44Q96CB5 159 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 TMEM68Q96MH6 324 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 MEGF11A6BM72 1044 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 ANKUB1A6NFN9 424 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 SPARCP09486 303 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 CCKBRP32239 447 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 ADAM8P78325 824 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 C17orf67Q0P5P2 114 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 OR10K2Q6IF99 312 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 OR10AC1Q8NH08 325 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 PIK3IP1Q96FE7 263 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 NECAB3Q96P71 396 aaPredicted RBP16■□□□□ 0.15
RAB40C-203ENST00000535977 AMELYQ99218 206 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 HRH4Q9H3N8 390 aa16■□□□□ 0.15
RAB40C-203ENST00000535977 MRPL22Q9NWU5 206 aaKnown RBP16■□□□□ 0.15
RAB40C-203ENST00000535977 LOC100289279A0A1B0GTE1 492 aa15.99■□□□□ 0.15
RAB40C-203ENST00000535977 hCG_1809904A0A1W2PP81 198 aa15.99■□□□□ 0.15
RAB40C-203ENST00000535977 A0A1W2PR64 198 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms