RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SP9P0CG40 484 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 H2BFSP57053 126 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF121P58317 390 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 TAF13Q15543 124 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 FAM209AQ5JX71 171 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 RAB11FIP2Q7L804 512 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 COMMD7Q86VX2 200 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 DVL3Q92997 716 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM41AQ96HV5 264 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 SGCZQ96LD1 299 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF416Q9BWM5 594 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 NCKAP5O14513 1909 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 OR6C65A6NJZ3 312 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 HMSDA8MTL9 139 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 M0R296 226 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 EIF1BO60739 113 aaKnown RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 RGS11O94810 467 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 PDGFAP04085 211 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 CD63P08962 238 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 RRASP10301 218 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 RAC1P63000 192 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 SGCAQ16586 387 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 C2orf68Q2NKX9 166 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 CDH26Q8IXH8 852 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 PTX4Q96A99 478 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 FOXRED1Q96CU9 486 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 SLCO5A1Q9H2Y9 848 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM138Q9NPI0 162 aa11.81□□□□□ -0.52
VPS33B-202ENST00000535906 TMA7Q9Y2S6 64 aaKnown RBP11.81□□□□□ -0.52
VPS33B-202ENST00000535906 ITGB2P05107 769 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ABOP16442 354 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF17P17021 662 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 CSNK1A1P48729 337 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ARPC4P59998 168 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 SSPNQ14714 243 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 MPPED2Q15777 294 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 NHLRC3Q5JS37 347 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 C3P1Q6ZMU1 363 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ABHD12BQ7Z5M8 362 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 PAQR4Q8N4S7 273 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 OR9K2Q8NGE7 335 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 OR5D14Q8NGL3 314 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 OR13C9Q8NGT0 318 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 SRXN1Q9BYN0 137 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 EXO5Q9H790 373 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 FARSAQ9Y285 508 aaKnown RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 NPIPA2E9PIF3 369 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 F5H5P2 479 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 NPIPA3F8WFD2 350 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 SIX6O95475 246 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 P04436 131 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ICAM2P13598 275 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 CX3CR1P49238 355 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 B3GALT5-AS1P59052 145 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 CSNK2A1P68400 391 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 PMPCAQ10713 525 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 SIGIRRQ6IA17 410 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF529Q6P280 563 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 RNF144BQ7Z419 303 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 YRDCQ86U90 279 aaKnown RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 TNFAIP8L1Q8WVP5 186 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM54Q969K7 222 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 DOCK10Q96BY6 2186 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 MOB1AQ9H8S9 216 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 KIAA1549Q9HCM3 1950 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF107Q9UII5 783 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-202ENST00000535906 KIF25Q9UIL4 384 aa11.8□□□□□ -0.52
VPS33B-202ENST00000535906 E9PLN8 166 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 I3L521 148 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 GOSR2O14653 212 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 VAMP5O95183 116 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 RAB3DO95716 219 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 HPP00738 406 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 RFPL3SP0C7P2 107 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF35P13682 527 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 CAPZA1P52907 286 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
VPS33B-202ENST00000535906 UNC119Q13432 240 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ACER2Q5QJU3 275 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 H3F3CQ6NXT2 135 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM123Q8N131 208 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ACBD4Q8NC06 268 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ASB13Q8WXK3 278 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 NKD1Q969G9 470 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF775Q96BV0 537 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-202ENST00000535906 TAAR9Q96RI9 348 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 SLC25A21Q9BQT8 299 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-202ENST00000535906 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms