RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 RPRD1BQ9NQG5 326 aaKnown RBP17.19■□□□□ 0.34
LTBR-205ENST00000535739 SAMD4AQ9UPU9 718 aaKnown RBP17.19■□□□□ 0.34
LTBR-205ENST00000535739 V9GYQ6 96 aa17.19■□□□□ 0.34
LTBR-205ENST00000535739 KIR2DS1A0A191URI9 304 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 RENP00797 406 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 ATP6V1B2P21281 511 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 PITPNBP48739 271 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 NLRC3Q7RTR2 1065 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 ATF6BQ99941 703 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 NUDT16L1Q9BRJ7 211 aaKnown RBP17.18■□□□□ 0.34
LTBR-205ENST00000535739 FN3KQ9H479 309 aa17.18■□□□□ 0.34
LTBR-205ENST00000535739 ARPC3O15145 178 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 FSTL3O95633 263 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 LCATP04180 440 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 SLC6A6P31641 620 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 GATA4P43694 442 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 IL13RA1P78552 427 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 HOXA4Q00056 320 aaPredicted RBP17.17■□□□□ 0.34
LTBR-205ENST00000535739 SLCO4A1Q96BD0 722 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 IFT27Q9BW83 186 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 CDADC1Q9BWV3 514 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 PNRC2Q9NPJ4 139 aaKnown RBP17.17■□□□□ 0.34
LTBR-205ENST00000535739 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 CLN8Q9UBY8 286 aa17.17■□□□□ 0.34
LTBR-205ENST00000535739 OR6C68A6NDL8 312 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 AQP12BA6NM10 295 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 FAM20BO75063 409 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 GADD45GO95257 159 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 HLA-DQA2P01906 255 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 IRF2P14316 349 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 SPIBQ01892 262 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 ECH1Q13011 328 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 SLC36A3Q495N2 470 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 WDR25Q64LD2 544 aaPredicted RBP17.16■□□□□ 0.34
LTBR-205ENST00000535739 BRD3OSQ6XYD6 125 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 DCDC5Q6ZRR9 648 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 ZBTB46Q86UZ6 589 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 AQP12AQ8IXF9 295 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 SDR9C7Q8NEX9 313 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 OR10S1Q8NGN2 331 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 OR2AJ1Q8NGZ0 328 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 CYB5R1Q9UHQ9 305 aa17.16■□□□□ 0.34
LTBR-205ENST00000535739 SEMG1P04279 462 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 MDKP21741 143 aaPredicted RBP17.15■□□□□ 0.34
LTBR-205ENST00000535739 OMGP23515 440 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 NOS3P29474 1203 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 GGT2P36268 569 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 CD200P41217 278 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 RAD23AP54725 363 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 ACTR3P61158 418 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 FGF12P61328 243 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 MALLQ13021 153 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 KPNB1Q14974 876 aaKnown RBP17.15■□□□□ 0.34
LTBR-205ENST00000535739 MPPED2Q15777 294 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 DEFB112Q30KQ8 113 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 CLEC12AQ5QGZ9 265 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 C16orf87Q6PH81 154 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 ZNF841Q6ZN19 808 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 PGAP1Q75T13 922 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 SPATA24Q86W54 205 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 CELF2-AS1Q8N7Q2 184 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 OR11L1Q8NGX0 322 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 Q8TCH9 128 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 SPRYD4Q8WW59 207 aaPredicted RBP17.15■□□□□ 0.34
LTBR-205ENST00000535739 PYURFQ96I23 114 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 MRPL22Q9NWU5 206 aaKnown RBP17.15■□□□□ 0.34
LTBR-205ENST00000535739 TMCC3Q9ULS5 477 aa17.15■□□□□ 0.34
LTBR-205ENST00000535739 TCRBV5S2A0A599 114 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 POM121CA8CG34 1229 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 C22orf46C9J442 243 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 PHYHO14832 338 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 HOXA3O43365 443 aaPredicted RBP17.14■□□□□ 0.33
LTBR-205ENST00000535739 OR10H3O60404 316 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 SMIM11AP58511 58 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 SLC35F1Q5T1Q4 408 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 SPATC1Q76KD6 591 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 ERGIC1Q969X5 290 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 TMIGD2Q96BF3 282 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 MAP6Q96JE9 813 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 TGP01266 2768 aa17.14■□□□□ 0.33
LTBR-205ENST00000535739 TCRBV3S1A0A5B6 114 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 CA6P23280 308 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 ANOS1P23352 680 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 PSMB10P40306 273 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 RPS27P42677 84 aaKnown RBP17.13■□□□□ 0.33
LTBR-205ENST00000535739 TPTEP56180 551 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 OR8G1Q15617 311 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 TREML4Q6UXN2 200 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 MRPL21Q7Z2W9 205 aaKnown RBP17.13■□□□□ 0.33
LTBR-205ENST00000535739 ZDHHC16Q969W1 377 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 TNFRSF19Q9NS68 423 aa17.13■□□□□ 0.33
LTBR-205ENST00000535739 M0R135 149 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 IDH3BO43837 385 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 RRM2P31350 389 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 PYCR1P32322 319 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 GSSP48637 474 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.12■□□□□ 0.33
LTBR-205ENST00000535739 SNAI3Q3KNW1 292 aa17.12■□□□□ 0.33
LTBR-205ENST00000535739 GPR157Q5UAW9 335 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms