RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DRAM2Q6UX65 266 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 LNX2Q8N448 690 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 SIGLECL1Q8N7X8 197 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 OR8D4Q8NGM9 314 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 OR10S1Q8NGN2 331 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 Q8TCH9 128 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 ZMYND19Q96E35 227 aaPredicted RBP13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 REEP1Q9H902 201 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 GGT3PA6NGU5 568 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 CD300LBA8K4G0 201 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 IFNGP01579 166 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 SPARCP09486 303 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 PPIAL4GP0DN37 164 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 T-ENOLP0DO92 83 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 CA6P23280 308 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 CD80P33681 288 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 PITPNBP48739 271 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 ENTPD1P49961 510 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 PPP1R8Q12972 351 aaKnown RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 SNAI3Q3KNW1 292 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 FAM98BQ52LJ0 330 aaKnown RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 KLF17Q5JT82 389 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF362Q5T0B9 420 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 DOK3Q7L591 496 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 RAB40AQ8WXH6 277 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 MS4A7Q9GZW8 240 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 CENPMQ9NSP4 180 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 UFSP2Q9NUQ7 469 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 CLN8Q9UBY8 286 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
CLSTN3-204ENST00000535313 IGHV2-70DA0A0C4DH43 119 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF593O00488 134 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 GMDSO60547 372 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 FAM20BO75063 409 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 OTX1P32242 354 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 BLVRAP53004 296 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 SLC25A1P53007 311 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF92Q03936 586 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 CRMP1Q14194 572 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 TRIM25Q14258 630 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 MICAQ29983 383 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 PRAMEF6Q5VXH4 476 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 OR2T5Q6IEZ7 315 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 DCDC5Q6ZRR9 648 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 OR2T29Q8NH02 315 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 SLAMF6Q96DU3 332 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 ADAT1Q9BUB4 502 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 ZMAT3Q9HA38 289 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 MRPL15Q9P015 296 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 U3KQV3 271 aa13.53□□□□□ -0.24
CLSTN3-204ENST00000535313 RIIAD1A6NNX1 92 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 SOX14O95416 240 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 GYPBP06028 91 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF3P17036 446 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 SPI1P17947 270 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PRTN3P24158 256 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 SLC15A1P46059 708 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PRKXP51817 358 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PAX2Q02962 417 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 BAMBIQ13145 260 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 MPPED2Q15777 294 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 KCNJ8Q15842 424 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PCK2Q16822 640 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 GLYATL3Q5SZD4 288 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PARP8Q8N3A8 854 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 PLPP7Q8NBV4 271 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 OR4Q3Q8NH05 313 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 LRGUKQ96M69 825 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 KCNJ15Q99712 375 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 OPA3Q9H6K4 179 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 ARMC1Q9NVT9 282 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.25
CLSTN3-204ENST00000535313 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF878C9JN71 531 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 PHYHO14832 338 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 PSKH1P11801 424 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 CALB2P22676 271 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms